Scomber scombrus (Atlantic mackerel): 133987436
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Entry
133987436 CDS
T10651
Symbol
uba1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133987436 (uba1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133987436 (uba1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133987436 (uba1)
Enzymes [BR:
ssco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
133987436 (uba1)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
133987436 (uba1)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133987436 (uba1)
Exosomal proteins of other body fluids (saliva and urine)
133987436 (uba1)
Exosomal proteins of colorectal cancer cells
133987436 (uba1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
BilD_C
DUF7243
Motif
Other DBs
NCBI-GeneID:
133987436
NCBI-ProteinID:
XP_062282787
LinkDB
All DBs
Position
10:17492843..17508353
Genome browser
AA seq
1057 aa
AA seq
DB search
MSSSPLSKKRRVSGTETKTGSHCSSSNSVRTDLSHTPANGMAKNGNDAEIDEGLYSRQLY
VLGHDAMKRMQNSNVLVSGMRGLGVEIAKNVILGGVRSVTVHDHGVAEWRDLSSQFYLRE
EDLGKNRAEVSQHRLAELNNYVPVTAYTGALTEDYVTKFQVVVLTNCTLEEQQTVGEYCH
SKGIKLIIADTRGLFGQLFCDFGEEMVVHDTNGEQPLSAMISMITKDNAGVVTCLDEARH
GFESGDYVTFTEVQGMTELNGCQPVEIKVLGPYTFSICDTTGFTDYVRGGIVSQVKMPKK
IAFKSFSSSLTEPEFVMTDFAKFERPGQMHVGFQAIHAFQKKHNHLPAPWGQADGEELLA
LAKEVNSAQTGSAKVEQLDEALIKKISFIAAGDLAPINAFIGGLAAQEVMKACTGKFMPI
MQWLYFDALECLTEDDGFSLTEEECAPRNSRYDGQIAVFGTKLQDILAKQRYFLVGAGAI
GCELMKNFAMIGLACGEGEVIVTDMDTIEKSNLNRQFLFRPSDVTKMKSDTAAAAVKQMN
PSIKITGHQNRVGPDTERVYDDDFFESLDGVANALDNVDARMYMDRRCVYYRKPLLESGT
LGTKGNVQVVIPFVTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPP
ENAIQYLSDPKFMERTLKLPGAQPVEVLEAVYKSLVTDCPHSWADCVAWARNHWQCQYSN
NIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLDFSTSNDLHMDYIMAGANLFAQSYGLPS
CNDRAGVVKLLQEIKVPPFTPRSGVKIHVSDQELQNSNSSVDDSRLEELKVQLPSPETSQ
FKLCAIDFEKDDDTNFHMDFIVAASNLRAENYDIPPTDRHKSKLIAGKIIPAIATTTAAV
VGLVCLELFKIIQGHKKLESFKNGFMNLALPFFAFSEPIAAPRHKYYENEWTLWDRFEVA
GMQPNGEEMTLRQFLDYFKNEQKLEITMLSQGVSMLYSFFMPAAKLKERLDLPMTEIVTK
VSKKKLGKHVKALVFELCCNDLSDEDVEVPYVRYTIR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcgtgtcaggaacagagacgaagacggga
tcccactgctcctcctctaactctgtcagaactgatctgtcccacacacctgccaacggc
atggctaagaatggcaatgatgctgagatcgatgaaggcctgtactccagacaactttac
gtgttgggccatgacgctatgaagcgcatgcagaactccaatgtcctggtctctggtatg
agaggtcttggagtggagattgccaagaacgtcatccttggaggagttagaagtgtcact
gtgcatgatcatggtgtggcagaatggagggacctttcctctcagttttaccttcgtgag
gaggatctggggaagaacagggcagaagtgagtcagcaccgcttggctgaactcaacaac
tatgttcctgtgacagcctacactggagcactcaccgaagactatgtgaccaagttccag
gtggtagtgctgactaactgcactctggaagagcaacagactgtgggagagtactgccac
agcaaaggaatcaagctgattattgcagacacacgtggtctgttcggccagcttttttgt
gactttggtgaggagatggtggtgcatgacaccaatggagagcagccattgagtgccatg
atttccatgattaccaaggacaatgcaggtgttgtgacatgtctggacgaggcccgccat
ggctttgagagtggagactatgtcaccttcacagaagtccagggtatgacagagctcaat
ggctgccagcctgtggaaatcaaagttctgggtccttacaccttcagcatctgtgacaca
actggcttcacagattacgtaagaggaggaattgtctcccaggtcaagatgcccaaaaag
atcgcttttaaatccttctcttcctccttgactgagccagagttcgtgatgacagatttt
gccaagtttgagcgtccaggacagatgcatgtgggcttccaggctatccatgccttccag
aagaaacacaaccaccttcctgcaccttggggccaggctgatggtgaagagctgttggcg
ttggccaaggaggtgaactcagcccagacgggatcagctaaagtggagcagttggatgaa
gctctgattaaaaagatttcatttattgctgctggtgacctggcccctatcaatgccttc
attgggggtctggctgcacaagaagtgatgaaggcatgcacaggaaaatttatgcccata
atgcagtggctgtactttgatgccttggagtgcctgactgaagatgatggattcagtctc
acagaggaagagtgtgcccctaggaacagtcggtatgatgggcagattgcagtgtttggc
accaagctgcaggatatccttgccaaacagcgctacttcctggttggagctggtgccatt
ggctgtgagctcatgaaaaactttgccatgattggactggcttgtggggagggtgaggtc
attgtgacagatatggacaccattgagaagtccaacctcaacagacagttcctcttcaga
ccctcagatgtcacgaaaatgaagagtgacacagctgctgcagcagtgaagcagatgaac
ccatccatcaagatcacaggtcaccagaacagggtcggccctgacactgagagggtctat
gacgacgacttctttgagagccttgatggagtggccaatgcactggacaatgttgatgca
cgtatgtacatggatcggaggtgtgtgtactaccgtaaacccctactggagtctggtact
cttggtaccaaaggcaatgtccaggttgtgatccccttcgtcacagagtcctacagctcc
agccaagacccacctgagaagtccatcccaatctgcaccctcaagaacttcccaaatgcc
attgaacacacactgcagtgggcccgtgatgagtttgagggacttttcaaacagccacca
gagaatgccatacagtacctctcagatcctaagttcatggagcgtacgctgaaacttccc
ggagctcagcctgtggaggtgctggaggctgtttacaagagtctcgtcacagactgcccc
cacagctgggcagactgtgtagcctgggcacgcaaccactggcagtgtcaatacagcaac
aacatccgccagttactgcacaactttcccccagatcagctcaccagctctggtgccccc
ttctggtctggcccaaagagatgtcctcaccccctagatttcagcactagcaatgacctg
cacatggactatataatggcaggagccaacctgtttgcccagtcatacggtttgccgagc
tgcaatgatcgtgcaggtgtggtcaagctgttgcaggagataaaggtgccaccctttact
ccgcgttcaggggttaaaatccacgtctctgatcaggagctacagaatagcaattcctct
gttgatgactcaagattggaggagctgaaggtccagctgccttctcctgagacttcccag
ttcaaactctgcgccattgactttgagaaggatgatgacaccaacttccacatggacttc
attgtggcagcatccaatctgagagcagagaactatgacattccccctactgacagacac
aagagcaaactgatagctggcaagatcattcctgccatcgccacgaccacagctgcagtg
gtgggtctggtgtgcctggagctcttcaagataatccaaggacacaaaaagctggaatca
ttcaagaacggcttcatgaacttggcactgcctttctttgccttctccgagcccatcgcc
gctcccagacacaagtactatgaaaatgaatggacgttgtgggaccgcttcgaggtcgca
gggatgcagcccaacggggaggagatgacactccgacagttcctggactactttaaaaat
gagcagaaattggagatcaccatgctttctcagggagtgtccatgctctattccttcttc
atgcctgctgccaaactgaaagagagactggacctgccgatgacagagattgtgactaag
gtgtctaaaaagaagctgggcaagcatgtgaaagccctggtgtttgagctatgctgtaac
gacctgtcggacgaagacgtggaagtgccctatgtcagatacaccatccgctga
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