Scomber scombrus (Atlantic mackerel): 133987447
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Entry
133987447 CDS
T10651
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X1
KO
K08538
farnesoid X receptor beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133987447 (nr1h5)
Nuclear receptors [BR:
ssco03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
133987447 (nr1h5)
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NCBI-GeneID:
133987447
NCBI-ProteinID:
XP_062282805
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Position
10:complement(8189373..8202537)
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AA seq
493 aa
AA seq
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MREWMELEMSFSAGGFLSAADGYCSTEQLQYYDMLADPLGYPLQDPDLQLLPYNQQQYSP
SNLPFSLYGSPSSSTPSPSSSSSSSQPCHPSYHYSPHCLEAPCEPGPDPHCGALAQGLGV
AGIPVGRRSRVGPGGKSRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYHC
KTGGGCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGGKGRGPEEEDST
DSRRVSSTSRLPGQASSVSLTREQKYIIDRMVEAHRLYRAQESSHCRLFEWPCADEGEGL
SNVVSPHLQRLLQFARTVPGFDLLDFPDQSSLLSVSSLEVMFLLSAQQFSNNPTSPSPVL
QLFSMSTHNWLRNVESKENLHSRTLVNSGSSEDLLTPVLNFFQSTAALQVTEAEYTLLTA
TALLCSDRASLLAASCVEKMQELILDLLSRMCGSQAGAARGGPQRFGRLLGRLTELRTLR
HNYLLLTRQQSGH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggatggagttggagatgagcttttcagcaggggggtttctctccgccgcg
gatggttactgctccacagagcagctccagtactacgacatgctggctgaccctctgggc
taccccctacaggaccctgacctccagctgctcccttacaaccagcaacagtacagccct
tccaacctgcccttctccctctacggctcaccgtcctcctccaccccttccccctcctcc
tcctcttcctcttcgcagccctgccatccttcgtaccactacagccctcactgcctggag
gcgccctgcgaacccggccccgacccgcactgcggagccctcgcccaggggctcggagtg
gcggggattcctgtggggcggaggtcgcgagtgggtccgggagggaagagcagaggtcag
gatgagctgtgtgtggtgtgtggagataaagcatcagggtatcactacaatgctctgacc
tgcgagggatgcaaaggtttcttcaggcgtagcgtgacaaaaaaagctgtgtatcactgt
aagaccggcggaggctgtgagatggacatgtacatgaggaggaagtgccaagactgccgg
ctgaggaagtgccgcgccgtgggaatgctggccgagtgccttctgacggaggtgcagtgc
cagtccaaacgactgaggaaaggaggtaaaggcagaggaccggaggaagaggacagcaca
gacagcaggagggtcagctctaccagcaggctacctggacaggcttcatctgtcagttta
acccgagagcagaagtacatcatagacaggatggtggaggcccatcgactgtacagagcg
caggagagcagccactgcaggttgtttgagtggccgtgtgcagacgaaggggagggcctg
tctaatgtcgtctcacctcatctgcaaagactgctgcagtttgccaggacagtgccaggt
tttgatctcctggactttccagaccagagctctctgttgtctgtctcttcattggaagtc
atgttcttgctctcagctcagcagttctccaacaacccaacaagccccagtccagtcttg
cagcttttcagtatgtcaacacacaactggctgagaaatgttgagtcaaaggaaaacctc
cacagcaggacgttggtcaattcaggaagcagtgaggatctcctcacaccggtgctcaac
ttcttccagagcacagcagcgctgcaggtgacggaggctgaatacaccctgctcaccgcc
acagctctgctctgctcagaccgggcgtccttgctggcggccagttgtgtcgagaaaatg
caggaactgatcctagacctgctgtctaggatgtgtgggtcccaggccggagctgcacga
ggggggccacagcggtttggccgtctgttgggcagactgacggagctacggacccttcgt
cacaactacctccttttgacaagacagcagtctggacactga
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