Scomber scombrus (Atlantic mackerel): 133987467
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Entry
133987467 CDS
T10651
Symbol
nr4a1
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133987467 (nr4a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133987467 (nr4a1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
133987467 (nr4a1)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
133987467 (nr4a1)
Nuclear receptors [BR:
ssco03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
133987467 (nr4a1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
133987467
NCBI-ProteinID:
XP_062282835
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Position
10:complement(25388742..25393588)
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AA seq
574 aa
AA seq
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MTCIHPQHGSQPFDNNLGSSELQNADFISRLTVDMSSPRDHLSPPSLPSISSLVGTQGGD
FDAYSCQFTATPAHITPPSGQETAPFKLDDLQVYGCYPGTFTLSYPDEAVSPGGSDYFGS
PASAPSPSTPGFQTQLAPTWDSAFGPYSPSPGYWGTEETSVQHAPSFFTFSSGSVEDMSH
LGQPHLREQDPFTLAHSHASTLTFPALAMEQACSHDGTDQLDGSLSPKLKSPNGNEGCCA
VCGDNASCQHYGVRTCEGCKGFFKRTVQKNSKYVCLANKDCPVDKRRRNRCQFCRFQKCL
AVGMVREVVRTDSLKGRRGRLPSKPKVVQDVTNTVSPVSMIASLVRAHIDSNPSVGKMDY
SKYDETEVSPNQKEDANDIKQFYDLLTTSMEVIRKWAKSIPGFSDFCMEDQELLLESAFV
ELFILRLAYRSNAEMDKLIFCNGAVLHKMQCVRSFGDWIDSILEFSQSLHRMKLDVSSFS
CLTALVIITDRHGLKESKRVEDLQNQLITCLKDHVSGCASDSLRPNYLSRLLGKLPELRT
LCIQGLQRIFYLKLEDLVPPPPIVEKIFMDTLPF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcatccacccccagcatggatctcagccctttgacaacaatcttggcagctcg
gagctccagaacgcagactttatctctaggttgactgtggatatgagcagcccacgggat
cacctctctcctccgtctctgccaagtatcagctccctggtgggcactcaggggggcgat
tttgatgcatattcatgccagttcactgcaacccctgcccacatcacgccgccatcaggc
caggagacggctccattcaaactagatgacctccaggtttacggctgctaccctggaacg
ttcacgctgagttacccggatgaggccgtttctcccggtgggtctgattattttggcagc
ccagcatcagccccgtctccatcaacccccggtttccagactcagcttgcgcccacttgg
gactcagcttttggtccttactcgcccagtccaggatactgggggactgaggagacctca
gtgcaacatgcaccctctttcttcacattcagttcagggtctgtggaagacatgtctcat
ttgggtcagcctcacttacgagagcaggaccctttcactttggcccattctcatgcatct
acactcaccttccctgccttggcaatggagcaggcatgtagccacgatggcacagaccag
ctggacgggagcttatcacccaaattaaaaagtccgaatggaaacgagggctgctgcgct
gtgtgtggggacaacgcctcctgtcagcactatggggtccgcacctgtgagggatgcaag
gggtttttcaagcgtacagtacaaaagaattccaagtatgtctgccttgccaacaaggac
tgtcctgtggacaagaggaggcggaatcgatgccagttttgccgtttccagaagtgtcta
gctgtgggcatggtgagagaagttgtaaggacagacagcctgaaaggacgaagaggtcgc
ctgccttccaagcctaaagttgtccaggacgtgacaaacacagtgtctccagtgagcatg
atcgcttcacttgtgagggcccatatcgactcgaaccccagtgttgggaaaatggattat
tccaagtatgatgagacagaagtcagtccaaaccagaaagaggatgcaaatgacatcaaa
cagttctacgacttactcacgacctccatggaggtgatcaggaagtgggcgaagagcatc
ccaggattctctgatttctgcatggaagaccaggaactgctgctggaatctgcgtttgtt
gaactattcatcctacgtcttgcatatcggtccaatgctgaaatggacaagctcattttc
tgcaacggggctgtgcttcataaaatgcagtgcgtccgaagctttggggactggattgac
tctattttggagttttctcaaagcctccatcgcatgaagctggacgtctcctccttctcc
tgcctcacagccctggtcataatcacggaccgacatggtcttaaggaatcaaaacgcgtg
gaggacctgcagaaccagctcatcacctgcctgaaagatcatgtctctggttgcgcctcc
gactccttgcggcccaattatttgtccaggctgcttgggaagttgcctgagctcaggact
ctgtgcattcaaggcctccagcgcatcttttaccttaaattggaagatttagttcctcca
ccaccgattgtggaaaagatcttcatggatactcttcccttttaa
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