Scomber scombrus (Atlantic mackerel): 133987481
Help
Entry
133987481 CDS
T10651
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04260
Cardiac muscle contraction
ssco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133987481 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133987481 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
133987481 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133987481 (cacna2d3a)
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133987481 (cacna2d3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
133987481
NCBI-ProteinID:
XP_062282849
LinkDB
All DBs
Position
10:17630966..17755828
Genome browser
AA seq
1088 aa
AA seq
DB search
MQVDRSCVVSSACLLLLFSTISTRVTEVGGSHQSIPPSVVKLWASAFGGEMKSISAKYSG
SQLLQKKYKEFERAVRVQEIDGLRLVKRLAEDMEEMFHKKAQAMKRLVEAAEEAHLQHEE
DPNLQYEYFNAVLINEVDEEGNSVELGGEFILQPNDHFNNLSVNLSLSVVQVPTNMYNKD
SAIVNGVFWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAFDCR
NRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEELH
YVEPCLNGTLVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFNLLSDFNETGRGSECS
QAIMLVTDGAVDTYDAIFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFTQIS
TLADVQENVMEYLHVLSRPKVIDREHDTVWTEAYIDSTLPQAQKLEDGQRPVLMTTVAMP
VFSTKNETRNRGILLGVVGTDVPVSELLKTIPEYKLGIHGYAFAITNNGYILTHPDLRPL
YGDGKKRRKPNYSSVDLSEVEWEDKDHTLRNAMVNRKTGTFSMEVKKSVDKGKRVLVLHN
DYYYTDIKGTPFSLGVALSRGHGKFFFRGNVTVEEGLDDLEHPDVALADEWTYCNTDEHP
EHRYLTQIEAIKLYLSGHEPHLQCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENSDKG
VEIAYLGTRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFV
YSLPFNTGSENKSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQKKFWTASRQCAALDG
KCSISCDDENINCYLIDNNGFVLVAEDYTLTGKFFGEAEGAVMSKLLQMGSFKRVTLYDY
QALCWVYSERSDSGHTLLDPYFAFFSAVKWILTELVIFLVEFNLYSWWHSDLIAKAQRIG
RTMVPCDTEYPAFVSERTIKENTGNIDCDGCIKSFVIQQIPSSNLFMVVVDNKCDCSMFE
PITMDPIEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAVSLTPSFTATLLC
ILLVLFPR
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggatcggagctgtgtggtatccagtgcgtgtctgcttttacttttctccact
ataagcaccagggtcactgaagtgggaggctctcaccaaagcatccctccgtccgtggtg
aagctgtgggcttcagcttttggtggggagatgaagtccatctctgcaaagtactctggc
tcccagctgctgcagaagaaatacaaggagtttgagcgggcagtgcgggtgcaggagatt
gatgggctgcggctggtaaagaggctggcagaagacatggaggagatgttccacaagaaa
gcccaggcgatgaagagactggtagaggcagcagaggaagcccacctacagcacgaggag
gatccaaaccttcagtatgaatacttcaatgccgtattgatcaatgaggtggatgaggag
gggaacagcgtagagctagggggagaattcatcctgcaacccaatgaccactttaacaac
ctgtcagtcaatctcagcctcagcgtggtccaggtgcccaccaacatgtacaacaaagac
tctgcaattgtcaatggggtgttctggtctgaggccttgaataaagtgtttgtggataac
tttgagagagacccatcactcatatggcagtactttggcagtgccaaaggctttttcagg
cagtacccagggatcaaatggaagccagatgaacacggggtgatagcttttgactgtcgt
aaccggaagtggtacatccaggctgccacttctccaaaggatgtggtgatcctggtggat
gtcagtggcagcatgaaaggcctgaggctgaccatcgccaggcaaactgtctcctctata
ctggacactctcggagatgacgacttcttcaacatcatcgcttacaatgaagaattgcat
tatgtggagccgtgcttgaatggaactctggtccaagcagacgtcaccaataaagatcat
ttccgggagcacctcgacaagctgtttgctcaaggcattggtatgttagacatagctctg
actgaggccttcaatcttcttagtgacttcaatgagactggaagaggtagtgagtgtagc
caggccattatgttggtgacagatggagcagtggatacatatgatgccatctttgccaag
tataactggccagagaggaaggtccgcatattcccttacctgattggtcgagagtcagcc
ttcgcagataatctgaaatggatggcatgtgctaacaaaggctacttcactcagatttcc
acattggccgatgtgcaagagaatgtgatggagtatctccatgtgctgagtcggcctaag
gtgatcgaccgggagcatgatactgtgtggactgaggcctacatcgacagcaccctcccc
caagcacaaaagttggaagatggtcaacgtccggttctgatgaccactgtggcaatgcct
gtgttcagcaccaagaatgagacgagaaatcgtggcatcctactaggggtggttgggaca
gatgttcctgtctccgagctgctcaagaccatcccagaatataagctgggcattcacggc
tacgcctttgcaatcaccaacaatggctacatcctcacccatccagatctacggccactt
tatggggatggcaagaagcgaaggaagccaaactacagcagtgtggatttgtcagaggta
gaatgggaggataaagatcacacgctgagaaatgccatggtcaacaggaagacagggaca
ttctccatggaggtgaagaagagtgtcgacaaagggaaacgtgtgctggtgttgcataat
gattactactacacagacatcaaaggaacaccattcagtctaggggtagctctctccaga
ggccacggcaagttcttcttcagagggaatgtgacagtggaggaaggacttgatgacttg
gagcatcctgatgtagcgctggcagacgaatggacatactgcaacacagatgagcaccca
gagcaccgctatctgacccagatagaggcgatcaaactctatctcagtggacacgagccc
cacctacaatgtgacaaggagctgattcaagaggttctttttgacgcagtggtaactgcc
cctttggaggcctattggaccagcttggtgctcaacaagtctgagaactctgataaagga
gtggagatagcatacctgggcacaagaacaggcctgtccagaattaacttgtttgtggtg
cctgacgagcttacaaatcaagacttcttgacagctgaagacaaagagggggtgttcaat
gccgatcactttcccctgtggtacaagagagcagcagaacaagttcctggtacctttgtc
tactccctgcctttcaacacaggatcagaaaacaagagtgttgtattggccagcaccgcc
attcaacttctggatgagaggaaatcaccaatagctgcggctgtgggcatccagatgaaa
ctggaattctttcagaagaaattttggacagccagcagacagtgtgcagctctagatgga
aaatgctccataagctgtgatgatgagaacatcaactgctacctcattgacaacaatggc
ttcgttctggtagcagaagactatacactgacagggaaatttttcggagaagcagaggga
gctgtaatgagtaagcttctgcagatgggctctttcaagagggtcactctgtatgactac
caggctctatgttgggtctattcagagagaagtgacagtggacacacactgttggatcct
tactttgctttcttctcagctgtgaagtggatccttactgagcttgtcatattcttagtc
gagttcaacttgtacagctggtggcactctgatctcatagctaaagctcagaggataggt
cgtaccatggtaccatgtgacacagagtacccagcctttgtctccgagagaaccatcaaa
gagaacacaggaaacatcgactgtgatggctgcatcaagtcctttgtgatccagcagatc
cccagcagtaatctcttcatggtggtggtggacaacaagtgtgactgcagcatgttcgag
ccaatcaccatggaccccatcgaaatcatgtataatgaatctctcaagtgtgaaagactg
aagatgcaaaaggacaggaggcgcccagatacctgtcatccttttcacccagaggagaac
tcaatggagtgtggaggagctgtgagtctcaccccatcgttcacagcaacactgctctgc
atcctcctggtgctgttccccaggtga
DBGET
integrated database retrieval system
