Scomber scombrus (Atlantic mackerel): 133987483
Help
Entry
133987483 CDS
T10651
Symbol
tuba1c
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04210
Apoptosis
ssco04517
IgSF CAM signaling
ssco04530
Tight junction
ssco04540
Gap junction
ssco04814
Motor proteins
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133987483 (tuba1c)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133987483 (tuba1c)
09143 Cell growth and death
04210 Apoptosis
133987483 (tuba1c)
09144 Cellular community - eukaryotes
04530 Tight junction
133987483 (tuba1c)
04540 Gap junction
133987483 (tuba1c)
09142 Cell motility
04814 Motor proteins
133987483 (tuba1c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133987483 (tuba1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133987483 (tuba1c)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987483 (tuba1c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133987483 (tuba1c)
04147 Exosome [BR:
ssco04147
]
133987483 (tuba1c)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133987483 (tuba1c)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133987483 (tuba1c)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133987483 (tuba1c)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133987483 (tuba1c)
Exosomal proteins of other body fluids (saliva and urine)
133987483 (tuba1c)
Exosomal proteins of colorectal cancer cells
133987483 (tuba1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
133987483
NCBI-ProteinID:
XP_062282851
LinkDB
All DBs
Position
10:complement(27371135..27374087)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctatccacgttggtcaggctggagtccagattggcaatgcctgt
tgggagctttactgcctggaacatggcattcagccggacggacagatgcccagtgacaag
actctgggaggaggagacgattccttcaacactttcttcagtgaaactggagccggaaag
cacgtccccagggctgtttttgtcgacctggagcccacagtcatcgatgaggtacgcact
gggacctaccgccagctcttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgaggacactacaccatcggcaaagagatcattgacctggtgctggac
aggatccgcaaactggctgaccagtgcacaggccttcagggtttcctggtgttccacagc
ttcggaggtggcaccggctctggtttcacctccctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctaccccgctcctcaggtgtccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagataacgaggccatctacgatatctgccgtaggaacctcgatatcgag
cgtccttcctacaccaatctgaacaggttgatcagtcagattgtgtcctccatcactgct
tcccttcgtttcgatggtgccctcaatgttgatctgactgagttccagaccaacttggtg
ccatatcctcgtatccacttccctctggccacctacgcccccgttatctcagctgagaag
gcttaccatgagcagctctcagtagctgagatcacaaacgcctgtttcgagccagccaat
cagatggtgaaatgtgaccctcgccacggcaagtacatggcttgctgccttctcttccgt
ggcgatgtggttcccaaagatgtgaatgccgccattgccaccatcaaaaccaagcgcacc
atccagtttgtggactggtgtcccactggtttcaaggttggcatcaactaccagcctccc
actgtggttcctggtggagatctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattacgaggaggttggagttgactccatt
gagggtgagggagaggaggaaggagaggaatattaa
DBGET
integrated database retrieval system
