KEGG   Scomber scombrus (Atlantic mackerel): 133987532
Entry
133987532         CDS       T10651                                 
Symbol
taf10
Name
(RefSeq) transcription initiation factor TFIID subunit 10
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    133987532 (taf10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssco03021]
    133987532 (taf10)
   03036 Chromosome and associated proteins [BR:ssco03036]
    133987532 (taf10)
Transcription machinery [BR:ssco03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     133987532 (taf10)
   Coactivators
    SAGA/TFTC/STAGA complex
     133987532 (taf10)
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     133987532 (taf10)
    STAGA complex
     133987532 (taf10)
    TFTC complex
     133987532 (taf10)
    SAGA complex
     133987532 (taf10)
    SLIK complex
     133987532 (taf10)
SSDB
Motif
Pfam: TAF10 Bromo_TP
Other DBs
NCBI-GeneID: 133987532
NCBI-ProteinID: XP_062282912
LinkDB
Position
10:11556007..11560349
AA seq 186 aa
MNIDNANQSVTTGVVSTTSSTSSNCIANDNATTNVSSIPSVTTNATASAAMVTPSSDVSV
SNGVYVPGGITNGDVKPAVNTTPLADFLLQLEEYTPTIPDAVTGYYLNRAGFEASDPRII
RLISLASQKFISDIANDALQYCKMKGTASGSSRSKTKDKKYTLTMEDLTPALSEYGVNVK
KPYYFT
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaatattgacaacgctaatcagtctgttactactggagtggtatctacgacgtcttca
acttccagcaattgtatcgcaaatgataatgcaacaaccaatgtcagcagcatcccgtct
gtcaccactaatgctacagcctcagctgccatggtgacaccatcatcagatgtatctgtc
tccaatggtgtttatgttcctggtggcatcaccaatggagatgtaaagcctgctgtcaac
accactcccctggctgatttcctcctgcagttggaagagtacactcccacaattcctgat
gcagttacaggatactacctcaaccgggctggctttgaagcttctgatccaagaataatc
cgtctgatctcccttgcgtctcagaagttcatctcagacattgctaatgatgcgctgcag
tactgtaaaatgaagggcactgcctcaggaagctcaaggagcaagacaaaggataagaag
tacactctgactatggaggacctgactcccgccctctcagaatatggtgtcaatgtcaag
aaaccatattacttcacatag

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