Scomber scombrus (Atlantic mackerel): 133987534
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Entry
133987534 CDS
T10651
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133987534
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133987534
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
133987534
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133987534
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133987534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_22
Vps4_C
Mg_chelatase
IstB_IS21
AAA_16
AAA_14
DUF815
AAA_24
nSTAND3
NPHP3_N
AAA_2
PhoH
Motif
Other DBs
NCBI-GeneID:
133987534
NCBI-ProteinID:
XP_062282915
LinkDB
All DBs
Position
2:complement(36485094..36495619)
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AA seq
488 aa
AA seq
DB search
MLSLLRALLCWLWSRCGSNITAGTRTCDGGSPEREDRVRSHHRRAFEFISAALRVDEAER
GDKHQAVGWYQRGISELEEGVAVQVTGSGEKCERDRRLQNKMKTNLMMTRERLQSLVEVI
SGSRAQTDVAYRPTHLHSANLHRTSNLNTSSHRPPAHTQTHGNLKGRPARHGGKLGSPTS
MPREKKETKNVDKKLASLILNEIVDSASSVRFEDVAGQDLAKQALQEIVILPALRPELFT
GLRAPARGLLLFGPPGNGKTMLAKAVAVESNATFFNISAASLTSKYVGEGEKLVRALFSV
AREMQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRP
QELDEAVLRRFSKRVYVALPMEQTRLKLLKNLLGKHGNPLSHRELSQLARMTDGYSGSDL
TSLAKDASLGPIRELCPDQVRNMEASEVRNICFSDFVESLKKIKRSVCPQTLELYSRWNR
SYGDTTAV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccctgctgcgggcgctgctctgctggctgtggagccgctgcgggtccaacatc
accgccgggactcgaacctgtgacggcgggagcccggagcgagaggaccgggtccggagc
caccaccgccgggcctttgaattcatctccgcggcgctgagagtcgacgaggccgagcga
ggtgacaagcatcaggcggtcggctggtaccagcgagggatcagcgagctggaggaagga
gtcgctgtccaggtgacgggcagcggagagaaatgtgaacgtgaccgacggctgcagaac
aagatgaagaccaacttgatgatgaccagagagcggctgcagtctctcgtcgaggtgatt
tcaggctccagagctcagactgacgtcgcctaccgaccgactcacctgcactcagcgaat
cttcaccgaacctccaacctgaacaccagctcacaccgcccccccgcccacacacaaaca
cacggtaacctcaagggtcgacctgctcgtcacggcgggaaactcggctccccgacatcg
atgccacgagagaagaaagagacaaagaacgttgacaagaagctcgccagcctgatcctc
aacgagatcgtcgacagtgcctcgtcagttcggtttgaagacgttgccggtcaggattta
gcgaagcaggccctgcaggagatcgtcatcctgccggcgctgcggccggagctgtttaca
ggcctgcgtgctccagccagaggacttcttctgttcggtcctcccggtaacggcaagacg
atgctggcgaaagccgttgcagtcgagtccaacgccaccttcttcaacatcagcgccgcc
agcttaacttccaaatatgtgggtgaaggagagaagctggtccgagctctgttctctgta
gccagagagatgcagccgtccatcatcttcattgatgaggtggacagtctgctgtgtgaa
cgtcgggaaggtgaacatgatgccagccgccgcctcaagaccgaattcctgatcgagttt
gacggggtgcagtcaggaggtgatgatcgggttttggtgatgggagccaccaacaggcct
caggagctggacgaagctgttctcaggcgtttttctaagcgtgtgtacgtggcgctgccg
atggaacagactcgcctcaagctgctgaagaacctgttggggaaacacggaaacccgctg
agccacagagagctgagccagctggccagaatgacggacggctactctggcagtgacctc
acctcattggctaaagacgcctctttgggaccaatcagagagttgtgtccggaccaggtg
aggaacatggaggccagcgaggttcggaacatttgtttcagcgacttcgtggagtctctg
aagaagatcaagaggagcgtctgtccgcagactctcgagctttacagccgctggaacaga
agctacggagacactacagctgtgtga
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