Scomber scombrus (Atlantic mackerel): 133987542
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Entry
133987542 CDS
T10651
Symbol
bpifcl
Name
(RefSeq) lipopolysaccharide-binding protein isoform X1
KO
K05399
lipopolysaccharide-binding protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133987542 (bpifcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133987542 (bpifcl)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133987542 (bpifcl)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
Motif
Other DBs
NCBI-GeneID:
133987542
NCBI-ProteinID:
XP_062282921
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Position
10:complement(11241020..11248007)
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AA seq
497 aa
AA seq
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MSQPVFDCEELCCFIHYLRSKMVVSVIVALMLVSCTCGENPAIQVVLTDKGLQYGKHVGA
GWIQEKLELVTLPDISGKVRIGILGSIGYTLTGVRITKCDFPEPSVEFNQGPTGFKTSTS
GLSIAVTGGWRTHYKAIHDGGTFNMALFNVDVTSVVELGKDPDGHISVNSVSCNAQIGNL
DIEFSGGASWIFQPFVDYFKGHIRGEIEYNICPTVEKYIVNAEQSLQAMNVSFEVNEDLT
FDIPLTGLPVIEESSLNLGFKGEFYSIKTHQEPPFEAQPFVMPVQSGYMLSAGLSEFTVN
SASYGYYSAGLLQAIINDSMIPPSSPVHLNTSSMGPFIPQLPKMFPGLLMTLQVYATEVP
QVSFHSGAVKMGSMAAVKAFAIQPNSTQTPLFKLLVDSEFSSKVWIAEGKLKGSMTMDNF
TLSLDSTEVGTFNTDALASMAKMGVKMALSKVNKQLTEGITLPRLKHAQLVNPVLTLEEG
FIAICSDAELLEDIDFN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccggtctttgactgtgaagagctttgctgtttcattcattatctccgcagc
aaaatggttgtgtctgtgatagtggcgctcatgctcgtctcttgcacctgtggagaaaat
cctgccattcaagtcgttctgacagacaaaggacttcagtacgggaagcatgtaggcgca
ggatggattcaggagaagttggagctcgtcactctccctgacattagtggtaaagtccgc
atcggcattcttggcagcataggctacacactaacaggtgtcaggatcaccaagtgtgac
tttcctgaaccgtctgttgagttcaatcagggccccacaggattcaagacatccacctca
ggcctcagtattgcagtaacaggagggtggaggacacactataaagcaatacatgacggg
ggaacattcaacatggctttatttaatgtggacgtgacctctgtagttgagctggggaaa
gatcctgatggacatatatctgtcaacagtgtcagctgcaatgctcaaattggaaatttg
gacatagagttctctggtggagccagttggatattccagccttttgtcgactatttcaag
gggcatattagaggtgaaatagagtacaacatctgtcccactgtggagaaatacattgta
aacgcggagcagagcctacaggccatgaatgtctcttttgaggtgaatgaagacctcact
tttgacatccctctcaccggcttacctgtcattgaagagtcaagtctgaatctgggtttt
aagggggagttctacagtatcaaaactcatcaggaacctccatttgaggcccaacctttc
gtcatgcctgtgcagtcaggctacatgttgtcagccggcctctctgaattcactgtgaac
tctgcctcctatggatactactcagctggactgcttcaggccatcatcaatgacagcatg
atacctccaagctctcctgtgcacctaaacaccagctcaatggggcctttcattcctcag
ttgcccaagatgtttccaggcctgctgatgactttgcaggtgtacgccacagaggttcca
caggtttccttccactctggtgctgttaaaatgggctcgatggctgctgtcaaggccttc
gccatccagcccaactctacccagactccactgttcaaactccttgttgactcagagttc
agcagcaaagtgtggatcgccgaaggaaaactgaagggctccatgacgatggacaacttc
acactgagtctggactcaactgaagtggggacctttaatactgatgctttggcaagcatg
gcaaagatgggagtgaagatggccttgtcaaaagtgaacaagcaacttactgaaggtatc
acgttacccagactgaagcacgcacagctggtcaatccagttctgacgttggaagaggga
tttattgccatctgttcagacgcggagctgctcgaagacatagacttcaactga
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