Scomber scombrus (Atlantic mackerel): 133987575
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Entry
133987575 CDS
T10651
Symbol
pard6b
Name
(RefSeq) partitioning defective 6 homolog beta
KO
K06093
partitioning defective protein 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133987575 (pard6b)
09144 Cellular community - eukaryotes
04530 Tight junction
133987575 (pard6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987575 (pard6b)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
133987575 (pard6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
133987575
NCBI-ProteinID:
XP_062282968
LinkDB
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Position
10:complement(4706289..4727029)
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AA seq
405 aa
AA seq
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MNKNHRVPSSRSLSAVEVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVELLVG
YADVHGDLLPINNDDNYHKAISTAAPLLRLFLQRKEEADYSTFGTDSLTRKKNTVLSAVL
LRPDANRKKPPVIISLPRDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSV
RVTPQGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKSLDQVTDMMIANS
HNLIITVKPANQRNNVVRSGGGGAASGSSGRSSDSGASYYGYSSQGVVGAAASMPSHIIQ
NFPVGELESDEDDEDLVIEAGGDAEPIRRAPSNYSMPSLPRYEPHLNLRVTTTSTSNLSI
NANGTLPASASSGSLSNANATSTTPSPDRAMDSRSLEEDGTVITL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaccaccgagtgccgagcagccgttctctgagtgccgtggaggtgaagagc
aagttcggcgcggagttccgtcgcttctccctggaccggtccaagccgggccgcttcgat
gagttctacggcctcctgcagcacgtgcaccgcatccccaacgtggaactgctggtgggc
tacgccgacgtgcacggcgacctgctgcccatcaacaatgacgacaactaccacaaggcc
atctccaccgctgctcccctgctcaggctgttcctgcagaggaaagaggaagctgattac
tcaacgtttggtaccgattctctgaccaggaagaaaaacacagtgctttcggcagttcta
ttgcggcctgatgccaacaggaaaaaacctccagttatcatcagtctcccgagggacttc
cgccccgtttcctccatcatcgatgtggacatcctgcctgagactcaccgacgtgtgcgt
ctatacaagcacggccaggagaagccattgggcttctacattcgtgacggctccagtgtg
cgggtcacaccgcagggcctggagaaggtcccgggcattttcatctctcggatggtgccc
ggcgggctggcagagagcaccggcctgctggcagtaaatgacgaggtgctggaggtgaat
ggtatagaggtggctgggaagtctctggaccaggtgacggacatgatgatcgccaacagc
cacaacctcatcatcaccgtgaagcctgccaaccagcggaacaatgttgttcgcagtgga
ggagggggtgcggcgtccggtagctcggggcgctcatcggacagcggcgccagctattac
ggctactcatcgcagggtgtggtcggcgcagcggcctccatgccatcgcatatcatccag
aacttccccgtgggggagctggagagcgacgaggacgacgaggacctggtgatcgaggcg
ggaggcgacgccgagcccatcagacgcgccccctccaactacagcatgccctctctgcct
cgctacgagccgcacctcaacctccgagttaccaccacatccacgtccaatctctcaatc
aacgccaacgggaccctgccagccagcgccagcagcggatcactaagcaacgccaatgcg
acgtcgactacgccgtcgccagacagagcaatggatagtcggagtctggaggaggatggc
actgttataactctgtag
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