Scomber scombrus (Atlantic mackerel): 133987589
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Entry
133987589 CDS
T10651
Name
(RefSeq) glutamate receptor-interacting protein 2-like
KO
K20251
glutamate receptor-interacting protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133987589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133987589
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
133987589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
133987589
NCBI-ProteinID:
XP_062282988
LinkDB
All DBs
Position
10:19927351..19956270
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AA seq
1130 aa
AA seq
DB search
MNMSARVVFGKARLTPKQLSFAFPQTDSLRKGSRSAGGKRRMFSFSLRCRLGIIKGRSKD
EGPYSKGSKESGSTDQSHSSQRRSLSEEYRGVTTVDLMKREGSSLGLTISGGSDKDGKPR
VSNLRPGGLAARSDQLNVGDYIKSVNGINLSKLRHDEIISLLKNIGERVVLEVEYELPPF
VQTPSGVITKTIEVCLHKEGNSFGFVMRGGFHEDWRRSRPMLVTYVRPGGPADREGTLKA
SDRVLSIDGMPLNREKHADALTMLMQSGQEALFLIEYDVSVMEAVQQASGPLLVEIVKGP
SASLGISLTTTMYRSKQVIVIDKIKAASVVERCGALHVGDILLSIDGTSTEHCSLMESMQ
LLGNTSEVVKLEILPASQSRLPVRPQDTVKVQKSNHHHWDQSSNYCHPPHASHGKTWSSP
SHPHNQQDHCKSLVSGGFSPSSTATSGFSSQGSNTLPCPIPPIAPTSPHGSTSKRRTRKK
DHKSSLSLASSSVGPGGQVFHVETSEVVLRGDPLTGFGIQLQGGVFATETLSAPPVVRFI
EPDSPAERCGLLQVGDRLLSINGIPTEDGTLEEAHQLLRDSALANKVTVEIEFDIAESVV
PSSGTFHVKLPKRRGVELGITISASKKPGKPLIISDIRKGSIAHRTGTLEPGDRLLAIDS
VRLENCTMEDAMHVLQQAEDMVKLRIQKDEDNIDELEMSGSIIYTVELKRYNGPLGITIS
GTEEPFDPIVISGLTKKGLAERTGAIHIGDRVLAINGVSLKGKPLSEAIHLLQMAGESVT
LKIKKQADQSDGRRPPEREAGFLSDTEDDLTDSQKMSKHSEVYSATVPSIDSAMSSWDGS
GFDAGYGSQGTYLHKASDILLNPNEWRRTKHRSQTSSRSAGLVHHTSLYDGSFTEDEWDK
IPGFVSPPRCHGTLNHEDSFWSQALQDLETCGQSEILRELEASMTGSALSLYLEETKTNE
DSMFQSENSPIKREGVHVESKNKSNLNMSTGPRDVASQGKGDPSDMLSPTTLALHKVTMR
KDLESHDFGFSVSDGLLEKGVYVNMIRPDGPADEAGLKPFDRILQVNRVRTRDLDCCLTV
PLIMEAGDSLNLVISRNPLATADTRLPDDCDDPSKSLFCFSEHRTNSIAL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtcagcaagggttgtattcggaaaggctcgcctcactcccaaacagctctcc
ttcgcttttcctcagacagattcactgaggaaaggcagccggtctgcaggaggaaagagg
aggatgttctctttttctctcagatgtcgactgggcatcatcaaagggagaagcaaagat
gaaggaccatactcaaaggggagcaaggagtctgggtcaactgaccagtcacattcctcc
cagaggcgcagcctttcagaggagtacagaggagtgaccacagtggacctgatgaaaaga
gaaggcagtagcctcggccttaccatctccggagggtctgataaggatggcaagcccaga
gtgtcaaacctacggccaggtgggctagctgccaggagtgaccagctgaatgtaggagac
tacatcaagtcagtgaatggcatcaacttgtcaaagcttcgccacgatgagattatcagc
ttgctgaagaacattggggagagagttgtgctggaggtggagtacgagctgcctccgttc
gtccagaccccatcaggagtcataacaaaaaccatagaggtgtgtttacacaaggaagga
aacagctttgggtttgtcatgagagggggctttcatgaggactggcgcaggtctcgtcct
atgttggtgacctacgtcaggcccgggggtccagctgacagagagggcactttgaaggcc
agcgaccgagtattgagcatagatgggatgcctttaaacagagagaagcacgctgacgct
ctgaccatgctgatgcagagcggccaggaagctctgttcctgattgagtatgacgtctct
gtcatggaggcagtgcagcaagcctcaggccctctgctggtggagatagtgaaaggtccc
tccgccagtctggggatcagcctcaccacgacaatgtacaggagcaaacaagttattgtt
attgataagataaaggcagccagcgtggtggaaaggtgtggagcgctccatgtaggtgac
atccttttgtctatagatgggaccagcacagagcactgctctctgatggagtccatgcag
cttcttggcaacacctctgaagttgtcaaactggagattctcccagctagtcagagcaga
cttcctgtcaggccacaagacacagtaaaagtgcagaagagcaaccaccatcactgggat
caaagcagcaactactgccatcccccacatgccagccacggcaagacatggagcagccca
agccacccacacaaccagcaggaccactgcaaatctctggtgagtggtggcttctcccct
tcctccacagccacctcaggcttcagcagccagggtagcaacacgctgccctgccccatc
cctccaatcgctcccaccagcccccacggctcaaccagcaagaggaggaccaggaagaag
gaccacaagagctcactatctctggcgtccagttctgttggcccaggggggcaagttttt
catgtggaaacaagcgaggtcgtcctgaggggggatccgctcacaggttttgggatccag
ctgcaggggggtgtctttgccactgaaaccctgtctgctcccccagtcgtccgctttatt
gagcccgacagcccagctgagaggtgtggactgctgcaggttggagacaggctgttgtcc
attaacgggatcccaactgaagatggcactttagaggaagcccatcagctgctcagagac
tctgctctggccaataaggtcacagtggagattgagtttgatattgcagagtctgtggtt
cccagcagtggcaccttccatgttaaactgcccaagcggagaggagtggagctgggcatc
actatcagtgcaagtaagaaacccggcaaacctctcatcatctctgacataagaaaagga
agcatagcacacagaacaggcactctggagcctggagacaggctgctggccattgacagc
gtccgcctggagaactgcaccatggaggatgccatgcatgtcttgcagcaggctgaggac
atggtcaaacttcggatacagaaagatgaggataacattgatgagttggagatgtcagga
tctataatctacacagttgagctgaagaggtataacggaccactgggcatcacgatttct
ggtacagaggagccctttgaccccatcgtcatttctggcctcaccaagaaaggcctggca
gagaggaccggggccatccatataggagacagagtcttggccatcaatggagtcagtcta
aaaggaaagccactgagcgaggccatccacctcttgcagatggccggagagtccgtcacc
ctaaagatcaagaaacaagccgaccagtctgatggccggcggcccccggaaagagaagct
ggttttctaagtgacacagaggatgatctgacagactcccagaagatgagtaaacactca
gaggtctactctgccactgtgcccagtatagattctgcaatgagctcctgggatggctca
gggttcgatgcgggctacggtagccaagggacatatcttcacaaagcttctgatatattg
ctcaatccaaatgagtggaggcgtacaaagcacaggagtcaaacaagttccagatctgca
ggcttagtccaccacacatcactctatgatgggagtttcacagaggatgagtgggacaag
atacctggattcgtcagccctcctcgttgccatggcaccctgaaccatgaagacagcttc
tggtcccaggccctgcaggacctcgagacctgtggccagtcagagattctcagggagctg
gaggcatccatgacaggtagtgctctaagtctgtacctagaggagaccaagaccaatgaa
gactccatgtttcagtctgaaaatagtcccattaagagggagggagtccacgtcgagtct
aagaacaaaagcaacctgaacatgtcaactggccccagagacgtagcatcccagggcaaa
ggggacccctctgatatgttgtctcctactaccctggcactgcacaaggtgactatgagg
aaagaccttgagagccatgactttggttttagtgtatctgatgggcttctggagaaaggg
gtttatgtcaacatgatccgaccagatggcccagctgacgaggcagggttgaaacctttc
gaccgaattcttcaggtgaaccgtgtcaggaccagagacttggactgctgtcttactgtg
cccctaattatggaagcaggagacagcctgaatttggtcattagcaggaatccgctggca
acagcagacaccaggctgcctgatgactgtgacgacccctcaaaatcactgttctgcttt
tccgagcacaggaccaacagcattgccctgtga
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