Scomber scombrus (Atlantic mackerel): 133987594
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Entry
133987594 CDS
T10651
Symbol
mbd6
Name
(RefSeq) proline-rich protein 36 isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133987594 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987594 (mbd6)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
133987594 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
133987594
NCBI-ProteinID:
XP_062282995
LinkDB
All DBs
Position
10:11316243..11331715
Genome browser
AA seq
1675 aa
AA seq
DB search
MMGGSETVSGDKDGVHTAAIHIPIGWQRRVEGGQVIYISPSGTALSSLDEVKTYLLTDGT
CKCGLECPLVIQKVFNFTVGVKVEQHSQPLGKAEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPFANLHHPEVSSGVDSRNPKRADVGREEENRGIYHPKLHPVPARPHNNLHPNPCATPK
SSHQFIYPYNGSSPVLHTGTNSHHPLDALRRLHHPPPLPVSSTSSSSSSFPAYSAAQRSP
RAPTPQNVSQGQRTPKTPETPGSPRLGPLSSPPPSSPMNLGGGGRGAQTHAHHPHGVIVG
GSPLSPSSSLSPSVHNMNCVSPHQRSRHPSASPSPLYEQGGGSTAAEGGGLTGSNFPQRR
KSSSSSPHSPLPCGSPNPSPHFPKYKLEDIMEQFKNSGNSSTNNHHILLPTNPSLLTNQS
SSNPHALSMKPSKSGMSPTPSTGPAGFGLNSTGPYLNHHHSHQGKMPHPASFPASSLLSA
AAKAQLANQITQGQSSNVASNQMNLPSSLEVLKEAQQQQSSKVTNSTLHNSNPPSSIAST
RPPHLSLAAASSVLFPPSHSLAQSLASSLPHMPPTAERSASHRKRQRRSPTVLSMLRDTQ
HLANGPRKTPPGDAVSATVINLSSSSSQHSSSSSSTSAAQNQNAVMLENHHHLLPGQTLR
LPAPRQTAHLSRPPRQSEALDFTTGLTPTPLGLDPPTQPLSALLHLLSVQNAQASASNSA
STQPESVPVEEGGHTNKQSPRLSPSSPLSNVRHPQTLSPCRTTNTNPLPLVAQPLSPPAS
SQFISVQSQSQPQSTKSSPLQRHSPASTAHSNLALHNNSSSFQRMSPAPSDKHQPTENHI
PKVDSVSQAPSREALPQGIVATEIGINSMSTSEDLSHPQGSVSMAISTSPKPLDLSNHVL
AILAASSTVPQGEGSSSNRTTDVVLPSQGNHTAGPEEPGCVDQKVSTVTKSLAATSPGPA
LSSNLGDNNSPHTPTSVGDSTAPLPLAEAFPFMNQEQLLQLLSSTGGLPSLLDPAVLASL
HLGGLWLGGQHAQMPPANATPQAPQNLTEQQQSEEQHLLIQQQETHQQNQDQQQKQQQIN
HNPLFPLLPLLSGAQGELPLNLLGLLNPLPPPASTPTQGQEADLGLTEKPSLQALLMASL
LLGQQQAHLLPLSGLSQLSQVSLEVPLQQQQQIPTTLEGLTLDKTSGLLDPSTLHGSGLL
EVSQGLLPLPPGAEGSLQALQSLLLPAALPPHHAAFLPLSPALLTAALSSAELNPPPPTQ
LAPAQQTQHTQPQVPTDAGVDTLIPLSLQGKDNTLLQQLLPTLLNPAVLGDLSGIAGLHN
MVGLGAGSILLPPVQTSALGMPLLQGPDGAINLLNNIQLNLAPPSEGEKPVLLQETQSPA
PQEDIPASPIAREVVPSPIPAPAPCQEPSPPPQRGSEGRSVIDPYTSFMDTIYTSFLQVN
AKEQEDGAHLGPSDPTSPFCALPPVSFPVEHHTPSTPVPTLPQASAPVSLSPRRACSLRN
PDLSRLSLEAAAHSPAQGTPKPTEDGATSPLQRKPVMVEGHTHSEPPLPPIYLEEAKTDC
TGPASAVCPYIDAGVDRQGHIPQAGYLSPRDGCSRGPNEETAGALLHTEQGRDQAGTVGG
ARRGRKRKQTLQNVLEDFRDMDATALEETKATTALLKPERSVRGRRRRGARSQRQ
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagactgtcagtggggacaaggatggggtccacaccgctgcaata
cacatccccatcggctggcagaggagagtggagggcgggcaggtgatctatatcagtcct
agtggcactgccctatcctctctggatgaggtcaagacgtatctgttgactgatggcacc
tgcaaatgcggtctggagtgtccactcgtcatccaaaaggtttttaacttcactgtggga
gtgaaggtagaacagcacagccagcctttaggcaaagcagagcaggacatgaccaaacta
tgtaaccatcgcaggaaagtggtagcaatggctgctctgtgtcggagtatgcaggcttca
cagctgccctttgctaaccttcatcatccagaggtgagcagtggagtggacagccgcaat
ccaaagagggccgatgtggggcgggaagaagagaaccgaggaatctaccatcccaaactc
catccagttccagctcgacctcacaacaacctgcacccgaacccctgcgccacccccaaa
tcctcccaccagtttatttacccttacaatggttcctccccggtccttcacacaggcacg
aactctcaccatcccctagatgccttgagaaggcttcatcatcctcctcctctccctgtg
tcctccacctcttcctccagctcctcattcccagcttacagtgctgcacagaggtcaccc
cgtgcccccacgcctcagaatgtcagtcaaggtcaaagaacacctaaaaccccagagact
cctggttctcctcggttagggcccctctcttcacctcctccttcctcccctatgaacctg
ggcggaggaggaagaggagcacagactcacgctcatcatcctcatggtgtcattgtggga
ggctcccctctctctccatcttcttctctctctccctctgtccataacatgaactgtgtg
tctcctcaccagcggtcccgccacccttcagcctctccctcccctctctatgagcaagga
ggaggctcaacagcagcagaaggaggaggactgacgggaagtaatttccctcagaggagg
aaatccagctcttcctctccacactcccctctcccctgtggctccccaaatcccagtccc
cacttccccaaatacaagctggaagacatcatggagcagtttaagaactcaggcaacagc
agcactaataaccaccacatcctactccctactaacccctctttactgaccaaccaaagc
agtagcaacccccatgctctctccatgaaaccctcaaagagtggcatgagtccgactccc
agcacaggaccagcaggttttgggttgaactccacagggccatatctgaaccaccaccac
agccatcagggcaagatgccacacccagcttcttttcctgcgagtagcctgctctctgcg
gctgctaaggctcaactggctaaccagataacccagggccagagctcaaatgtggccagc
aaccagatgaacttgccctcttctctggaggtcttgaaagaggcacagcagcaacagtca
tcaaaggtaacaaacagcactttacataacagcaatcctccctcctccatcgcttctact
aggccgccccatctctcccttgcagcagcctcctccgtcctctttcctccatcccactct
ctggcccaatccctggcttcctccttgccccacatgcctcccacagcagagcgcagtgcg
tcacacaggaagaggcaacggcgatctcccacagtgctcagcatgctaagagacacccag
catctggctaatgggccgcggaagaccccaccaggagatgctgtttctgccactgttatc
aacctatcctcctcttcctcccagcactcctcctcctcctcctctacctcagctgcgcag
aaccagaatgctgtcatgttagaaaaccatcatcatctcctccctgggcagacgctcagg
ctccctgctcctcgtcagacagcacacctttccaggcctcctcgacaaagcgaggctctg
gatttcactacaggcctgacaccgacacctcttggcttggatcctccaacacagcctctg
tctgctttgttacacctgctcagtgtgcagaatgcacaggcgtcggcatccaactctgct
tcaactcagccagaatctgtgcctgttgaagaaggtggacacactaataaacagagcccc
agactctcaccctcctctccactttctaatgtgaggcacccacagactctgtcaccgtgc
cgaaccactaacactaatcctctccccttggtggcacagccgctttctcctcctgcctca
tctcagttcatatcagtgcagtctcaatcacagcctcagtctactaaatcaagtcctcta
cagagacattctccagcttctacagcccactcaaatttagctttacacaacaacagcagc
tcttttcagcgtatgtccccagctccatcagacaagcatcaaccaactgagaaccacatt
cctaaagttgactctgtttctcaggcaccttcgcgggaagcattaccacagggtattgta
gcaacagagattggcattaacagcatgtctacatctgaggacctgagtcatcctcaaggc
agtgtttctatggcgatatccacctccccgaagcctcttgatcttagcaaccatgtcctg
gccatactcgcagcatcctccactgtgccccagggagagggtagctcctccaaccgtacc
actgatgttgtgttgccttcccaaggaaatcacactgcagggccagaggagcctggatgt
gtggaccagaaggtctccacagtgaccaaatctctagcagccaccagccctggacctgcc
ctctcctctaatcttggtgataataacagtcctcatacacctacatctgtgggcgactca
actgctcccttacctctggcagaggctttccccttcatgaaccaagagcagctgcttcag
ctgctgtcatccacaggaggtctgccatccctcctggaccctgcagtcctggcttctttg
cacctagggggactgtggttgggtgggcaacatgcacagatgcctcctgccaatgctaca
ccacaagcaccacagaatcttacagagcaacagcaatcagaggagcagcatttactaata
caacaacaagagactcatcagcaaaaccaggatcagcaacagaagcagcaacaaataaac
cacaatcctctctttcctttgttgcccttgttgagtggtgcccaaggggagttgcctctg
aaccttttgggcctgctgaacccacttccacccccagcctcaacacctacccaaggacag
gaagctgatttggggctaacagaaaaacctagccttcaggctctgcttatggcatccttg
ttgctcggacaacagcaggcacatttgttacccctatctgggctgagtcagttgagccag
gtcagcttggaagttcctctccagcagcaacagcagatccccaccacattggagggcctc
accctggataagacctctggcctcctggatccatcaaccctacatggatcagggctgttg
gaggtctcccagggccttctgccccttcctccaggagctgagggctctctccaagctctg
caatctctgctccttcctgccgctcttcctcctcatcatgcagcctttctgcccctaagc
cccgccctactcactgctgccctgagttcagctgaactcaacccacctccccccacccag
ttagctcccgcacagcaaacccaacatacccaacctcaggtacctactgatgctggtgtt
gataccctcatccctctatctctccaaggcaaggacaacaccctcctccaacagttactg
cccactttgcttaaccctgctgtattaggagatctttctggcatcgcaggcctccataac
atggtgggtcttggagcaggttccatcctcctacccccagtccagacctctgctctaggc
atgcctctgctgcagggtcctgatggagccatcaacttgctcaacaacatacagctaaac
cttgcacctccctcagaaggagagaagccagtcctgttgcaggaaacacaaagccccgcc
ccacaggaagacattccagccagtccgattgcccgtgaagttgtccccagtcccattcca
gctcctgccccttgccaagaaccctccccacccccacagcgagggtctgagggcaggtct
gttattgatccttacacctctttcatggacacaatttatacctccttccttcaagtcaat
gctaaagagcaggaggacggggcccacttggggccatctgaccctacttcacccttctgt
gccttaccgccggtttctttccctgtggagcaccataccccgtccacccctgtcccaact
ctgccccaggcaagtgccccagtctccctcagtccacgtcgggcttgttcgctccgcaat
cctgacttatcccgactcagcttggaagcagctgcccattcgccagcccaggggacgcct
aagcccactgaagacggggctacgtctcccttacaaaggaagccggtcatggtagaggga
catacccattcagagcctcctctgccacccatatacctggaggaggctaagacagactgt
actgggccagcttcagctgtgtgcccctatatagatgcaggggtggacaggcagggacat
attccacaggcggggtacctcagtcccagggatggttgcagtagggggcccaatgaggag
acagcaggagcactgctgcacactgaacagggaagggatcaagcaggaacagtgggggga
gccagaagaggaaggaaaaggaaacaaacgctacagaatgtgttagaagatttcagagac
atggatgctacagcactagaggaaaccaaggctacgacagcactgctgaagcctgagagg
tcagtccgtggcaggaggagacgaggcgcaaggtctcagaggcagtga
DBGET
integrated database retrieval system
