Scomber scombrus (Atlantic mackerel): 133987627
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Entry
133987627 CDS
T10651
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133987627 (ctnnd1)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
Atx10homo_assoc
ARM_UBP24_USP9X-Y
Motif
Other DBs
NCBI-GeneID:
133987627
NCBI-ProteinID:
XP_062283055
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Position
2:6716941..6743310
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AA seq
876 aa
AA seq
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MEPGQMMQETYTVEEDPQESLPVVSVETSDDGTTRRTETTVKKVVKTTTTRTVIPSVSDT
LSLDGGGSVTGMGGYTSPMDRAYRHGPGGGVPMDYPTHTVPRNYHYGPPAGYEEYRPGPP
SEAYTSLSRGARMDDRYRPVHPDGYRTLDPSYRAPSRNQLDPYAAQPQVGRMGSALELSA
IPRFVAEPYGLEDDQRSIGYDEPDYGLGHAMHYSTVPRNHHGFPHGPPRRTGSYEGTLDG
DMSGAGDMYYWGSGAPLAQGERGSMASLDSTLRKGPGPGGWRQPELPEVIAMLNYRLDPV
RSNAAAYLQHLTYKNDKVKSEVRRLKGIPALVSMLDIPNREVHFAACGALKNISYGKDPD
NKIAIKNCDGVPALVRLLRKTRDQDLTDTITGTLWNLSSHDSVKMEIVDHALHALSDEVI
VPHSGWERGSNGGGGGEENCKPRHLEWETALTNTAGCLRNVSSERSEARRKLRECTGLVD
SLMYIVQSQIDCKDVDNKLIENSVCLLRNLSYHVHREIPGCERYQEAAPLNQGPAPSSQK
GGCFSSRKSKGRKDEDATADVIDIPKRTTLAKGYELLYQPEVVRIYTSLLKESKNPTVLE
ASAGAVQNLCAGGSGYGRYIRALLRMEKGLPMMTELLAHGNDRVVRAMSGALRNLAIDAR
NRDLLGKHAVPHLVANLPGGGQSQPVRALSEETVVSVLSTLHEVLGSSLEAAKILRASQG
IERLVLINKDGNRSEREVRGAGLVLQTVWGYKELRRTLEKDGWKKTDFMVNLNPPSNNTR
ANGGYEDSTLPLIDKGGKGDREMIPLNDMGPDAYSTLDQRGRRNTLDDTLQPADKDGVQG
GMYGERQASLPLMDSYDEKLIVCITRRQPPPTYCPC
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggtcagatgatgcaggagacgtacacggtggaggaagatccccaggagtct
ctacctgttgtctccgtggagaccagcgacgatgggaccacgcggcgcacagaaaccacg
gtaaagaaagtagtaaagaccactaccactcgcacagtcatcccctccgtatcagacaca
ctttccctggatggtgggggttcagtgacgggtatggggggctacacctcacccatggac
cgggcttacaggcatggacctggaggaggtgtccccatggactatcccactcacaccgtg
ccccgcaactatcactatggacctccagcaggctatgaggagtaccgtcccggaccccca
tctgaggcctacacaagccttagccgaggtgctcgcatggatgatcgctacagaccagtc
catccagatggctacagaactctggatccaagctacagagcccccagcaggaaccagctg
gacccctatgctgctcagccacaggttgggcgtatgggaagtgctctggagctatctgcc
atcccgaggtttgtcgcagagccatacggtctggaggatgatcagcggagcattggctat
gatgagcctgactatggcttgggacacgcgatgcactacagcaccgtgccccgcaaccac
cacggcttcccccacgggcccccacgtaggactgggagttacgagggcactttggatggt
gacatgagcggtgcaggggacatgtattactggggatcaggagcaccgctggctcagggt
gaaagaggaagcatggcttcattggacagcactctaaggaaaggtccaggccctggcggc
tggcgtcaacccgagctgccagaggtcatcgccatgctcaactacaggctggatccagtc
aggagcaacgcagcagcatacctgcagcatctcacctataagaacgacaaagtgaagtct
gaggttcgtcgtctcaaaggcattccagctctggtctctatgctcgacatcccaaacaga
gaggtccactttgcagcctgcggagcactaaagaacatctcatatggcaaagatccagac
aacaagatcgccattaagaactgtgacggagtgccagctctagtcaggctgctgaggaaa
acccgcgaccaggacctcaccgacactatcacaggaactctgtggaacctgtcgtcccac
gactccgtgaaaatggagattgtggaccatgcgctgcatgccctctccgacgaagtgatc
gtgccacattcgggctgggagcgagggagcaacggaggaggaggaggggaagaaaactgc
aagcccagacatcttgaatgggagacggccctcaccaacacagcaggctgcctgagaaac
gtgagttcggagcggagcgaggccaggaggaagctgagggagtgcacaggattggtcgac
tcgctcatgtacatcgtccaatcccagatcgactgcaaagacgtcgacaataagttgata
gagaacagtgtgtgtttgctgaggaacttgtcctatcatgtgcatcgcgaaatccctggc
tgtgagcgctaccaagaggctgcacccctcaaccaaggccccgccccgtccagccagaag
ggcggctgcttcagttcccgcaagagcaaaggtaggaaagatgaggatgcaactgcagat
gttatagacattccaaagaggaccacacttgctaaaggttatgagctgttgtaccagccg
gaggtggtccgcatctacacctctctgcttaaggagtccaagaatcccacagtgttggaa
gcctcagctggagccgttcagaacctgtgcgccggaggctctggatatggtcgatacatc
cgtgccttgctgcgcatggagaagggtctacccatgatgactgaacttttggcccacggc
aacgaccgcgtggtccgagccatgtctggagcgctccgcaacctggcgatcgacgcacgc
aacagagatctgctaggtaaacatgcggtgcctcacctggtggccaacctgcccggcggc
ggtcagagtcagcctgtgcgagcgctgtcagaagagacggtggtgtcggtattgagcacg
ctccatgaggtgctgggctccagtctggaagcagctaagatcctcagggcctcacaggga
atcgagagactggtgctcatcaacaaggacggtaaccgttctgagcgggaggtgcgcggg
gccggcctggtgctgcagacagtgtggggttacaaggaactgcggcgcactctggagaag
gatggctggaagaagacagacttcatggtcaacttaaaccctcccagcaacaacaccagg
gccaacggaggatatgaggacagcactctgccgctcatagacaaaggaggcaaaggtgac
cgtgaaatgattccactgaatgacatgggaccagatgcctactccacactggaccagaga
gggagaaggaacactctggatgacacacttcaacctgctgacaaagatggagtacaggga
gggatgtatggggagaggcaagcctctttgcctctaatggattcttacgatgaaaaactg
attgtgtgcatcacaagacgacagcctcctcctacctactgcccttgctga
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