Scomber scombrus (Atlantic mackerel): 133987652
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Entry
133987652 CDS
T10651
Name
(RefSeq) putative helicase mov-10-B.2
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133987652
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987652
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
133987652
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133987652
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
133987652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
MOV-10_Ig-like
AAA_19
AAA_30
Mov-10_helical
UvrD-helicase
ResIII
HYDIN_VesB_CFA65-like_Ig
AAA_22
AAA_16
Helicase_RecD
AAA_7
NPHP3_N
T2SSE
SLFN-g3_helicase
STAT_alpha
AAA
ATPase_2
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
133987652
NCBI-ProteinID:
XP_062283080
LinkDB
All DBs
Position
10:complement(16839099..16855320)
Genome browser
AA seq
1002 aa
AA seq
DB search
MPQKKPCQLQMLPAAQPVQNIGSDTSRCLDELQNASDVEAQMAQQARQKIQERLKKKVVP
LTVKNSGLKTVYLSFRTFDFVRNIFTVRDSHGNSIKTIRKHTLGPGQAYKIKVHFHADHA
GFYEQLLIFTFETHQPSSDEFEIMRLLEVIHHTSFSEELLPTATNSLCRLQTEKSMSTEG
ELTWPKPVVPLEQYPMPKSTKDFMKSDTHLQETLLNWKNYSKRFHLLLHLEELQLKTEIE
KFNQDDVTMFRDKSNKNLLILKIVGASGNSSSLLSASQVLVTPLEFERGSFENAAYKGLI
HHEDAEQVHVQFCEKFLKQFKEGLRFKVNFIVNRLPLRVQHRAAALAYKHRLKKVLFPTG
NISSQQSCSQSKLLGLENNPEQFLAIQNIVAASAKPAPYLVFGPPGTGKTVTLVEAIKQI
VKTQTSCNILVCAHSNSATDHLCEKILAEKTCRRKLYRLYALNCSMKNIPQILKHKCNLD
KKTNTFMIPSKEELIKYKIMVTTLLTAARLVTGGIPPGHYPYVFVDEAGQAAETECIIPL
AGLIQPNRCQIVLAGDPKQSGPIITSKLAVKHGMDVSLLERLMRDINLYKSHGTCGFNSC
FVTKLLRNYRSHPEILKIPNELFYEGQLQPYAPKEKCSKYCKWEQLPKKGFPLIFHGVAG
SIERDARCPSVYNMAEVEVLKEYLKALINYLHKKGVTQIGPEEIGIIAPYRKQVEKIQIA
LQMDKDLRKENLEHILVGSVEKFQSKEFNIILVSTVRSSPKLTAHKQQFTLGFVDNEKRF
NVAMTRARALLIVVGDPRVLKTDKLWNKFIHYCSKAGGYRGITISGAEDENHQASGNKHI
HKYPHTEIKSWFSSNFLKLNSDKTEVLLVGSKSSLTNTPSFTIPIDNSSVSPSTQVKSLG
VVLDSSLSFQTHINKVTQSAYFHLHNINRLRPSLTSNSAAILVHTLVTSRLDYCNSLLFG
LPHKSLRCTTVSIQRRNPTTEWHGGFDLLLKLDLYFCVTSTA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaagaagccgtgccagctgcagatgttgcctgcagcacagcctgtccaaaat
ataggatcagatacatctagatgcctggatgagctacaaaatgcatctgatgtcgaagca
cagatggctcagcaggcccgccaaaagattcaagagcgtctgaaaaagaaagttgtgccg
ctgactgtgaagaactctggtctcaaaacagtttatttgagttttcggacttttgacttt
gtaaggaacattttcaccgtcagagattctcatggaaacagtatcaagactatcaggaag
cacactcttggaccaggacaggcatataaaatcaaggtccacttccacgcagaccatgca
ggcttctatgaacagttgctgatctttacgtttgaaacacaccagccgtcatcagatgaa
tttgagattatgcgcctcttggaagtaatacatcatacgtcctttagtgaagagctcctc
cccacagccacaaactcactgtgccgcctccaaactgagaagtcaatgtctactgaaggt
gagttgacgtggccaaagcctgtggtgcctttggagcaatatccaatgcccaaaagtaca
aaagacttcatgaaatcagacacgcacctgcaggagacacttctgaactggaagaactac
tccaagagattccacctgctgttgcatctcgaggagctccagctgaagacagaaatcgag
aagtttaaccaggatgacgtgaccatgttcagagacaaaagcaacaagaatctcctcatt
ctgaagattgtaggtgcctctggaaactcttcatccttgttgtctgcaagccaagtgctg
gtgactcctttagagtttgagaggggaagttttgaaaatgcagcttacaaaggcttgatc
catcatgaggatgcagagcaggtccacgtgcagttctgcgaaaaattcttgaagcaattc
aaggagggcttgaggttcaaggtgaactttattgtcaaccgcctgcccctgcgtgtccag
catagagcagcagccctggcgtataagcacagactgaagaaggtgctgttccctactgga
aacatttcttcccaacaatcatgttcccagagtaagctgttagggttggagaacaaccca
gagcagttcctggccattcaaaacattgtagctgcttctgcaaaacctgccccttacctg
gtatttggtcctcctggtacaggcaaaactgtgactttggtggaagccatcaagcagata
gtgaaaactcagacatcatgcaacatcctggtttgcgctcactccaacagcgcaaccgat
cacctctgtgagaagatactggctgaaaagacatgcaggcgcaagttgtatcgcttgtat
gccctaaactgctctatgaaaaatattccccaaatattaaagcataaatgcaacctggac
aaaaagacaaacacatttatgattccttctaaagaggagctgataaagtataagatcatg
gtcaccacacttctaactgcggcaaggctagtgacaggagggattcctcctggtcattac
ccttatgtctttgtggatgaggcaggccaggctgcagaaacagagtgtatcatcccatta
gcaggtttaatacaaccaaacagatgccaaatagtgttggctggagaccctaaacagtca
ggccccatcatcacatccaagttggcagtgaaacatggcatggatgtgtccctgttggag
cgtctgatgagggacatcaacctgtacaagtcacatgggacatgtgggttcaacagttgc
tttgtaacaaaattactgaggaactacaggtcacatcctgaaattctgaaaattcctaat
gagctattttatgaaggacaacttcaaccttatgctcctaaggagaaatgcagtaaatac
tgcaaatgggaacagttgcccaagaaaggttttcctttgattttccatggagtggcaggt
tctattgaacgtgatgccagatgcccctctgtttacaacatggcagaggtggaggttttg
aaagaatacttaaaagccctcatcaactatcttcacaaaaagggtgttacacaaattgga
ccagaagaaattggcatcattgcaccatacagaaaacaagttgagaaaatccagatcgcc
cttcagatggacaaagatctcaggaaagaaaacttagaacacatattggttgggtcagtg
gagaagtttcagagtaaagagttcaatattattctggtgtctacagtgcgcagcagtccc
aaactgacagcgcacaagcagcaattcactctgggatttgttgataatgagaagaggttc
aacgtggcaatgacccgagcccgagctctactgattgtggtgggagacccccgagtcttg
aaaactgacaaactctggaacaagtttatccattactgctccaaagcagggggttaccgt
ggcattacaatctctggtgcagaggatgagaatcaccaagcctctggtaataagcacatt
cacaaatatccccacactgaaatcaaatcctggttctcttccaactttctcaaactcaac
agcgataaaactgaggtcctcctagttggttcaaaatcctctctcactaacactcccagt
ttcaccatccccattgacaactcctctgtttccccctccactcaggttaagagcctgggt
gtcgtccttgacagctctttgtcattccagactcacattaataaggttacccagtcagcc
tacttccatcttcacaatatcaaccgcctccgtccgtccctcacttccaacagcgctgcc
atcctggtccacactctagttacatcccgcctagactattgcaactccctcctcttcggt
ctcccccacaagtccctccgctgcactacagtgtctattcaaaggcgcaatcccactact
gagtggcacgggggctttgacctgctccttaagcttgatttatacttctgcgtcacgtca
acggcgtag
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