Scomber scombrus (Atlantic mackerel): 133987653
Help
Entry
133987653 CDS
T10651
Name
(RefSeq) putative helicase mov-10-B.1
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133987653
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987653
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
133987653
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133987653
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
133987653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_Ig-like
AAA_12
AAA_11
MOV-10_beta-barrel
Mov-10_helical
AAA_30
AAA_19
UvrD-helicase
ResIII
AAA_22
Cep192_D4
AAA_16
AAA_7
T2SSE
AAA
NPHP3_N
SLFN-g3_helicase
ATPase_2
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
133987653
NCBI-ProteinID:
XP_062283081
LinkDB
All DBs
Position
10:16900027..16917526
Genome browser
AA seq
993 aa
AA seq
DB search
MTHVEPLREGSGGRTNRPSSAKPWPLEMQLFPGPNYWQVATPFWQTESSPQALGYMLLNL
PTGMFHKWPAGKLSGAKRKDVLGPTVPKDPSFNNFSEVKALYVDQWHSHRDRQPVRTQNG
AATPGPVETYTSAKEAVTGVRARRKLASSLMNKLKTDRAQFISDKHGVSIRSDHQFEDGK
LCLCVETTSEYVVNLTVDNTGTKPVHFTYYTPLNRLSYVSLNDERRVTKTNPLTLNPGDG
YEIQVRFRCTLVGFYPATLAFEFQPDLQSSTAFHIVRFIEAQCMTHLGRELAPIVPYKPR
SLPTVIPETYCTIVEGQRPEGLSVIKLKNEVELKNYKIPPYVNQLIRSLKRGTHLNDRRS
TLLECPLSWKKYSGRFQLLLYLEEFQMEVDIRKYNIPNNDGEYASLVRDPNNKKLLILKV
PGVSENRPSVIRGDKLLVYPEGEKGVKYSGYVHSVQLDSVKLGFGSELLDRFEERMKFNV
EFTVSRLTLRLQHRAAELAATYRLKEVLFPAAPTSFCQQPELPRLSLFDSQLERNPEQYQ
AVQHIVVGSSRPAPYLVFGPPGTGKTVTLVEAIKQIEKSQTSCHILACAHTNSATDLLWE
KILDNVDGHKVYRMYASSHDVKCVPEQLKACSNLVGECYEYPAKEKLMEYRILVTTLLTA
GRLVTGNIPVGHFTHVFVDEAGHALETECVIPLAGLLSAESGQVVLAGDPKQLGPILRSP
FALKYGMGVSLLERMMNDFPLYQKDEDVFNKRFVTKLLRNYRSHPAILKIPNELFYDGEL
QVCADKNVRNSYCNWEYLPRRDFPLIFHGVTGIDEREASSPSFFNIAEVEVLMDYVKKLL
ATQAKKGLAVITLQDIGIIAPYRKQVQKIRQALQKVGKDLKRVDMDTLKVGSVEEFQGQE
RRVILVSTVRSSREYVETDKQFNLGFVKNEKRFNVAVTRAKALLIVVGNPRVLNADPVWA
WFIQYCRDEGGYTGFVQAEEDEDMVMRLAALCI
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgtcgagcccctcagagagggtagcggaggtcgtaccaaccgtccaagtagt
gcaaagccctggccactggagatgcagctgttccctggacccaactactggcaggttgca
acgcccttctggcaaacagagagcagtccacaagccctgggatacatgcttctgaactta
cccactgggatgtttcacaagtggccagctgggaagttgtcgggagccaagaggaaggat
gtcctggggccgacggtccctaaggacccatctttcaacaacttctcagaagtcaaagct
ctgtatgtggaccagtggcactcacacagggaccgtcagccagtgcggacccagaatgga
gcagccactcccgggccagtagagacctatacctcagcaaaagaagcagtgacaggggtt
cgagccaggaggaaactggccagttcattgatgaacaagctcaagacggacagggctcag
ttcatttctgacaaacatggtgtcagcatcaggtccgaccatcagtttgaggacgggaaa
ctttgcttgtgtgtggaaaccacatctgagtatgtggtaaatctgactgtggataacacg
ggaacaaaacctgtgcatttcacctactacaccccgctgaaccggctcagctacgtctct
ctaaatgatgaacgcagagtgaccaagacaaaccctctcacattaaacccaggtgatggc
tatgagatccaggttcgattccgctgcactttggttggtttctatccagccacactggcc
tttgagtttcaaccagacctgcagtcctccactgcattccacattgtacgctttattgag
gctcaatgtatgacccacttaggacgggagcttgcacctatagtcccttacaaacctcgc
tcccttcctaccgttatccctgaaacttactgcacgattgtagaagggcagcgacctgaa
gggctctctgtgattaagctaaaaaatgaagttgagctaaaaaattacaaaataccacca
tatgtgaaccagctcatccggtcactgaagaggggtactcacttaaacgatagaagaagc
accttgcttgaatgtcccttgagctggaagaagtactcagggaggttccagctgctgctt
tatctggaggagtttcagatggaggtggacatcaggaaatacaacatccccaacaatgat
ggagaatatgcctccttggtcagagatccaaacaacaagaaacttctcattctaaaggta
cccggtgtgtctgagaatcgtccgtctgtgatacgaggcgataagctgcttgtatatcct
gaaggagagaaaggggtgaagtacagcggctatgtccacagtgtacagctggacagtgtc
aaactgggctttggatcagaattgttggatcgctttgaagaacgaatgaagttcaatgtc
gagttcactgtcagccgcctgactctgcgtcttcagcacagagcagcagagctggcagct
acatacagactgaaagaggtgttgtttcctgctgcacccacatccttctgtcagcaacct
gagcttcccagactcagtctgtttgactctcagctggagagaaacccggagcagtatcaa
gctgtgcaacacattgtagttggctcatccagacctgctccttacctggtgtttggccct
cctggaacaggcaaaacagtgactctggtggaggccatcaaacagatagagaagagtcag
acctcctgccacatcctggcctgcgctcacaccaacagtgctacagatctgctctgggag
aagattctggacaatgtggacgggcataaagtataccgcatgtatgccagcagccatgat
gtaaaatgtgtccctgaacaattaaaggcatgctctaacctggtaggggagtgttacgaa
tatcctgctaaagagaagctgatggagtacaggattctggttaccaccctgttaactgct
ggaaggctggtcacagggaacattcctgtcggacatttcactcacgtgtttgtggatgag
gcaggacacgctctggagaccgaatgtgtaattccactggcagggctgctctctgcagag
tctggtcaggttgttctggctggggaccccaagcagctgggacccattctcagatcccct
tttgcactgaaatatggcatgggagtgtccctcttggaacggatgatgaatgattttcct
ctataccagaaggatgaggatgtgttcaacaagcgctttgtcaccaaactgctgcgcaac
tacaggtcccatcctgccattctgaagattcccaacgagctcttctatgacggagagctc
caggtctgtgcggacaaaaatgtacgcaactcctactgcaattgggaatacctcccacgg
agggatttcccattaatttttcatggggtgacgggcatcgatgagcgtgaggccagcagt
ccttcgttcttcaacatagcagaggtggaggtgctgatggactatgtgaagaaactgctg
gcgacacaagcaaagaagggcctggctgtgatcacgcttcaagacataggcatcatcgcc
ccctacaggaaacaggtgcagaaaatccgtcaggccctgcaaaaagttgggaaagacctt
aaacgtgtggacatggatactctcaaggttggttcggtggaggagttccaaggtcaggag
aggagagtgatcttggtgtctacagttcggagcagccgtgaatacgtagagacagacaaa
cagttcaacctcggctttgtcaagaatgagaagaggttcaatgtggctgtgactcgagct
aaagcccttctaattgtggtgggaaaccccagagtgctgaacgcagatcctgtctgggcc
tggttcatccagtactgtagagatgagggaggctacacaggatttgtacaggcagaggaa
gacgaggacatggtgatgagactcgctgccctgtgcatctag
DBGET
integrated database retrieval system
