Scomber scombrus (Atlantic mackerel): 133987823
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Entry
133987823 CDS
T10651
Symbol
gpkow
Name
(RefSeq) G-patch domain and KOW motifs-containing protein
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133987823 (gpkow)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133987823 (gpkow)
Spliceosome [BR:
ssco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133987823 (gpkow)
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Gene cluster
GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
KOW
G-patch
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
133987823
NCBI-ProteinID:
XP_062283268
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Position
10:24577671..24584675
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AA seq
513 aa
AA seq
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MASHGEEDTSTSKSFVSQDQGEKKAAVSFGFTKTVSKFKPSAVDAEIKKDYKDYLTGIDR
NELQSTKPCEKPKEYIIPLIQKNRWHKPDRADQSEGKGVKTHDSAPESESVDSQAVKELI
EDSRRQLDEWQNGTQPEKNLNLSIPLLMQNKVPDGFEDGDHIKVDLRPESATEADYESIP
VEAYGIAMLKGMGWNKEEGIGRTFKQDVKPIEHQLRPKGLGLGADRSAIKDLEPGKKRRP
PKPGDEQEKEEELVMGPGGCVLVESGAHKELYGKIEGVDPDNARVMVKLAVGGKTVTISQ
YGIKLVGRKEYEKYSKDLSRFSKASKEKEKEKEKDRDKERQRRDEKERSHSDKHKSSERE
REGGRDERKRKHKESSHDRERPPEKEARRPPAPPSWLQRDLKVRFIDKAFKGGRYYNSKM
RVEDVLTPAICVCRTEEGRLLDDVKQDMLETIIPKSDNDLVMVVLGEHRGQIGRILQRDK
NKCKAMVQLERYEEKIFTLDYDLICHYVGASDH
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcacggagaagaagatacaagcacctctaaatctttcgtttcacaggatcaa
ggagagaaaaaagctgcagtgtcgtttggttttactaaaaccgtcagtaaatttaaacct
tcggctgttgacgctgagattaagaaagactacaaagattacttaacgggaatcgacagg
aatgaattgcagagtacaaaaccatgtgagaagcctaaagagtacatcatccctctgatc
cagaagaaccgctggcacaaaccggaccgagccgaccagagtgaggggaaaggcgtcaag
acacacgactcagccccggagagcgagtccgtggactctcaggctgtcaaagagctcatt
gaagattcacggaggcagcttgatgagtggcagaatggcacgcagccagaaaaaaacctg
aacctcagcatccccttgttgatgcaaaacaaagtgcccgatggatttgaggatggagac
cacataaaagtggacttgcggccagagtctgcgacggaggcagattatgagagcattcct
gttgaagcgtatggaatcgccatgctaaaggggatgggctggaataaagaagaaggtatt
ggacgcacctttaaacaagatgtaaagccaatcgaacatcagctccgtccaaaaggtttg
ggcctcggagcagatcgttcagcgataaaggacctggagccaggcaagaagcgacgtccg
cccaaaccaggcgacgagcaagagaaggaggaggagctagtgatgggccccggaggctgt
gtgctggtggagtcaggcgcacataaagaactctatggcaagattgaaggagtcgatcca
gacaacgctcgagttatggtaaagctggctgttggtggcaagacggttacaatcagccag
tatggtatcaaactggtcgggcgcaaagaatacgagaaatacagtaaagacctcagtcgc
ttcagtaaagcaagcaaggagaaggagaaggagaaagagaaagatcgagacaaggagcga
cagaggcgggatgagaaagagaggagtcacagtgacaaacacaagtcttcagaaagagaa
agagaaggaggaagagatgagaggaagagaaaacacaaagaatcaagtcatgacagagag
agacctccagagaaggaggcgaggcgaccaccggctcccccctcctggctccagagagac
ttgaaagttcgctttatagacaaagctttcaaagggggcaggtactacaattcaaagatg
cgcgtggaggacgtcctgacgccggccatctgtgtgtgtcgaactgaagagggacgactg
ttagacgacgtgaagcaggacatgctggaaacgatcatcccaaaaagtgataatgactta
gtaatggttgtcctgggcgaacacagaggacagattggccgtattctccagcgggacaag
aacaagtgcaaagcgatggtgcagctcgaaagatacgaggagaaaatcttcacattggac
tatgatttgatttgtcattatgttggagcgtctgatcactga
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