Scomber scombrus (Atlantic mackerel): 133987837
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Entry
133987837 CDS
T10651
Name
(RefSeq) acidic mammalian chitinase-like isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00520
Amino sugar and nucleotide sugar metabolism
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
133987837
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
133987837
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
133987837
NCBI-ProteinID:
XP_062283289
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Position
10:23765663..23813338
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AA seq
474 aa
AA seq
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MSKLILIAGLFLCFGSLVSSSRLVCYFTNWSQYRPGNGKFMPSNIDPNLCTHLIYAFAGI
NEGNELVSIEWNDDQLYKSFNDHKQRNPNLKTLLAVGGWNFGTQKFTTMVSSPANRNTFI
QSSIKFLREHGFDGLDLDWEYPAARGSPPQDKQRFTTLCKELLQAYEAEGKASGRPRLMI
SAAVSAGKGTIDAGYEIAEIAKYVDFINVMTYDFHGTWERVTGHNSPLYKGSQDTGDNVY
LNTDFAMRYWRDMGTPVEKLNMGFATYGRTFRLSTQSSQVGAPASGPAAAGTFTREAGFW
SYYEICGFLKGASVQRIEDQKVPYAVKQNDWVGFDDKTSYETKARYLKDNRFGGAFIWAL
DLDDFNGQFCGQGPYPLISYLRTLVASDLPPLPTPGPTLAPVNPSTNTKPPGPTIARTTK
SPDPDNFCATKAGGLYAKPDAPGSFYSCANGITWVQHCQATLVFRESCKCCDWP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctaattctaatagcaggtctctttctctgctttggaagtttggtttcatcc
tccaggctggtgtgttatttcaccaactggtcccagtatagacctggcaatgggaagttt
atgccttcaaatattgatcccaacctgtgtacccacctgatctatgcttttgctggtatt
aacgagggaaatgagttggtcagcatagagtggaatgatgaccaactctataaatctttc
aatgatcacaaacagaggaatccaaatcttaaaacactgttggcagtcggaggctggaac
tttggaacacaaaaattcactactatggtgtcgtcaccagccaacaggaatacgtttatt
caatcttctattaaattcctgagagaacacggttttgatggacttgatctggactgggaa
tatcctgctgcaagaggaagtcctccgcaggacaagcagagattcaccacattatgcaag
gaactcctacaggcgtatgaggctgagggaaaagcatctggccgtcccagattaatgatt
tctgctgctgtgtctgctgggaaaggaactattgatgctggttatgaaatcgcagagatc
gcaaagtacgtcgattttattaacgtgatgacatatgactttcatggcacctgggagagg
gtcaccggacataacagccccttatacaaaggatcccaagataccggagacaatgtttac
ttaaatactgactttgccatgaggtattggcgggacatgggaacacctgtagaaaagcta
aatatgggctttgcaacatatgggcgaacatttcgactgtctactcagtccagtcaggtt
ggagcaccagccagtggtcctgctgctgctggtacttttactagggaggccggattctgg
tcctattatgagatttgtggtttcctcaaaggcgccagtgtccagcggattgaggatcag
aaagtgccatatgctgtcaagcaaaatgactgggttggatttgatgacaaaaccagttat
gagactaaggctcggtacctaaaggacaacagatttggaggagccttcatctgggctctg
gatctcgacgactttaacggacagttctgtggacaaggaccctatcctctcatcagctat
ctccgtactctagtggcttcagatcttcctccacttcccactccaggccccactctagct
ccagtgaatccatccacaaacacaaaacctcctggacctacaatcgctcgtaccactaaa
agccctgaccctgataacttctgtgcaacaaaggctggtgggctttatgccaaacctgat
gcaccaggttctttttacagttgtgccaacggcatcacctgggtccaacactgccaagct
actttagtctttcgagaaagctgcaaatgttgtgattggccataa
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