Scomber scombrus (Atlantic mackerel): 133987839
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Entry
133987839 CDS
T10651
Name
(RefSeq) acidic mammalian chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00520
Amino sugar and nucleotide sugar metabolism
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
133987839
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
133987839
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GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Lipase_GDSL_2
Motif
Other DBs
NCBI-GeneID:
133987839
NCBI-ProteinID:
XP_062283291
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Position
10:23816811..23820237
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AA seq
455 aa
AA seq
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MSKLILIAGLFLCFGSLVSSSSLVCYFTNWSQYRPGNGKFMPSNIDPNLCTHLIYAFAGI
NDGHELVSAEANDEQLYKSFNGLKQRNPNLKTLLAVGGWVFGSEKFSTIVSSPANRNTFI
QSSIKFLREHDFDGLDLDWEYPAARGSPPQDKQRFTTLCKELLQAYEAEGKATGRPRLMI
TAAVAAAKDIVDAGYEIAELAKYLDFINVMTYDLHGTSENITRHNSPLYNGSRDTGNYVY
LNTDFAMRYWRDMGTPVEKLNMGFASYGRTFRLSTQSSQVGAPISGPAAAGTFTREAGFW
SYYEICGFLQGASVQRIEDQKVPYAVKQNDWVGFDDKTSYEIKARYLKDNGFGGAFVWAL
DLDDFNGQFCGQGPYPLISYLRSLVVSDLPSGPMIAPLNKSPDPDNFCATKIDGTYAKPD
AASSFYNCANGIITWVQHCPSTLVFQESCKCCTTP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctaattctaattgcaggtctctttctctgctttggaagtttggtttcatct
tccagtttggtgtgttatttcaccaactggtcccagtatagacctggcaatgggaagttt
atgccttcaaatattgatcccaacctgtgtacccacctgatctatgcttttgctggtatt
aacgacggacatgagttggtcagcgcagaggcaaatgatgagcaactctataaatctttc
aatggactcaaacagaggaatccaaatcttaaaacactgttggcagtcggaggctgggtt
tttggaagtgaaaaattctctactatagtgtcgtcaccagccaacaggaatacgtttatt
caatcttctattaaattcctgagagaacacgattttgatggacttgatctggactgggaa
tatcctgctgcaagaggaagtcctccgcaggacaagcagagattcaccacattatgcaag
gaactcctacaggcgtatgaggctgagggaaaagcaactggccgtcccagattaatgatt
actgctgctgtggctgctgcgaaagatattgttgatgctggttatgaaatcgcagagctt
gcaaagtacctggattttattaacgtgatgacatatgaccttcatggcacctcagagaac
atcacacgacataacagccccttatacaatggatcccgagacactggaaactatgtttac
ttaaatactgactttgccatgaggtattggcgggacatgggaacacctgtagaaaagcta
aatatgggctttgcatcatatgggcgaacatttcgactgtctactcagtccagtcaggtt
ggagcaccaatcagtggtcccgctgctgctggtacttttacaagggaggccggcttctgg
tcctattatgagatttgtggtttcctccaaggcgccagtgtccagcggattgaggatcag
aaagtgccatatgctgtcaagcaaaatgactgggttggatttgacgataaaaccagttat
gagattaaggctcggtacctaaaagacaacggatttggaggagccttcgtctgggctctg
gatctcgacgactttaacggacagttctgtggacaaggaccctatcctctcatcagctat
ctccgctctctagtggtttcagatcttccttctggacctatgatcgctcctctcaataaa
agccctgaccctgataacttctgtgctacaaagattgatgggacttatgccaaacctgat
gcagcaagttctttttacaattgtgccaacggcatcatcacctgggtccaacactgccca
tctactttagtctttcaagaaagctgtaaatgttgtactacgccctaa
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