Scomber scombrus (Atlantic mackerel): 133987870
Help
Entry
133987870 CDS
T10651
Symbol
kif1b
Name
(RefSeq) kinesin-like protein KIF1B isoform X1
KO
K10392
kinesin family member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133987870 (kif1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133987870 (kif1b)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Kinesins
133987870 (kif1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kinesin
Kinesin_assoc
DUF3694
Microtub_bd
KIF1B
PH
FHA
PH_11
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
133987870
NCBI-ProteinID:
XP_062283327
LinkDB
All DBs
Position
10:complement(13488405..13546270)
Genome browser
AA seq
1697 aa
AA seq
DB search
MSGASVKVAVRVRPFNSREMSKDSKCIIQMQGNTTTILNPKTPKEPAKTFSFDYSYWSHT
TPEDPSFASQNLVYNDIGKEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEEGQEGIIP
MLCEDLFEKINADNNKEDLSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLMGPYVE
DLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKHDSESDLSTE
KVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVSKKKKKTDFIP
YRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKNIKCNAVINEDPN
NKLVRDLKDEVSRLKELLRAQGLGDILDTPIGSLTASPSSGSLCSQGGLQSVTSIQERIM
STPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMGVAIREDGGTLGV
FSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHIREEHCVFRS
ERNANGDVIVMLVPCELSETYVNGKRVEGAIQLRSGNRIIMGKNHVFRFNHPEQARAERE
KTPSAETPVEPVDWTFAQRELLEKQGIDMKQEMEKRLTEMEILYKKEKEEADQLLEQQRL
VYESKLQELQKQVETRSLVAETPDEEELEEEEEEEVPWTQHEFEMAQWAFRKWRFHQFTS
LRDQLWGNAVYLKEANAISVELKKKVQFQFVLLTDTLYSPLPPELLPPEPEKERDSRPFP
RTVVAVEVQDLKNGATHYWSLDKLKQRLDQMREMYDRAGEMASANQEDGEGSLTGNDPFY
DRFHWFKLVGRAFVYLSNLLYPVPLVHRVAIVTEKGEVRGFLRVGVQAIAADEEAPDYGS
GVRQSGTAKISFDDEYFKKNDFPSTVMTRSGLSLEELRIVEGQGQSSEIITPSEELNRIT
DMDLKLGNIADTKLSCGDGLAGQLEVGSIFTFRVTVLQASGVPPEYADIFCQFNFLHRHD
EAFSTEPLKNTGKGAPLGFYHVQNISVEVTESFIEYIKSKPIVFEVFGHYQQHPLHLHCQ
DLISPSTPSRKYYPIPMPLSKPVPATKLNTITKSNLGQCVSKYDLLVWFEISELEPTGEY
IPAVVDHSGGLPCHGTYLLHQGIQRRITVTLIHEKGSELHWKDVRELVVGRIRNKAEVDD
TAADAVLSLNIISAKNIKSSHNSNRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSA
YLELDHCIQPAIITKDICMVFYSRDAKISPPRSLRNLFGSGYAKTPDCNRVTGIYELSLC
KMSDTGSPGMQRRRRKVLDTSVAYVRGEENLAGWRPRGDSLILEHQWELEKMEQLHEVEK
TRHLLLLREKLGEAPPVGTAPTTKSLSESLSPSMSSGTLSTSTSISSQISSTTFESAITP
SESSGYDSTDIESLVDREKELATKCLRLMTHTFNNEYNQVVNSISDCKLSDISPIGRDPS
VTSFSSATLTPSSTCPSLSDSRCGSMGQKTPENSSRASSPSCSDYENFPMVPSLETSYLA
RAGKNEFLNLVPDIEEMRPGSVVSKKGFLSFMEPRSNSWVKHFVVVRRPYVFIYNSDKDP
VERGVLNLSTAQVEYSEDQQAMLKTPNTFAVCTKHRGILLQANNEKDMNDWLYAFNPLLA
GTIRSKLARRRSGLLKN
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcgtctgtaaaagtcgctgttcgggttcgacccttcaactccagggagatg
agcaaggattccaaatgtatcattcagatgcaaggcaacactacaactattctcaacccc
aaaaccccaaaggaaccagcaaagaccttcagttttgattactcctactggtcacacact
acgccagaagaccccagctttgcatcacagaaccttgtatacaatgacattggcaaggaa
atgctgcagcatgcttttgaaggctacaacgtctgcatctttgcttatggccagacagga
gctggcaaatcctacaccatgatgggcaagcaggaggaagggcaggaaggaatcattccc
atgctctgtgaagatctatttgagaaaatcaatgcggacaacaacaaagaggacctctcc
tactcagtagaggtcagttacatggaaatctactgcgagcgtgtgcgagatttgctcaat
cccaaaaacaaagggaacctgcgagtgcgagagcatcctctgatgggcccctatgtggag
gacctgtccaaactagctgtcacctcctacacagacatcgctgacctaatggatgcagga
aataaagccagaaccgtggctgccaccaacatgaatgagaccagcagcaggtcccatgct
gttttcaccatcgtcttcacacagaagaaacacgacagcgagtcagacctttccacagaa
aaggtcagcaaaattagtctggtagacttggcaggaagtgaaagagcagattccactgga
gctaaaggtaccaggctaaaggaaggagcaaacatcaataaatcgctcaccacattagga
aaggttatctctgccttggctgaagtgagcaagaagaagaagaagaccgacttcatcccg
tacagagactcagttctgacatggctgctgagggagaaccttggtggaaactctagaaca
gctatggtagctgccctcagtcctgcagatatcaactacgatgaaactctcagcacactc
cgctacgctgaccgagctaagaacatcaaatgcaatgctgtcatcaatgaggatcccaat
aataagctggtgcgcgatctgaaggacgaagtgtctcgactgaaggagctgctccgtgcc
cagggcctgggagacatcctggacacccctattggttccctgacagcctctccatcctct
ggctcactgtgcagccaggggggcttgcagtcggtcacaagcatccaggagcgtatcatg
tccacacctggaggagaggaggcaatcgaaagactcaaggaatcagaaaagatcattgcc
gagctcaatgaaacatgggaagagaaactgcgaaagacggaggcaatccgcatggagagg
gaggccttgcttgcagagatgggtgtcgcaatccgtgaagacggaggcactttgggggtc
ttctctcctaaaaagactccacacctggttaacctaaatgaggatcctctcatgtcagag
tgtctgctctactacatcaaagatggaattacaagggtgggtcaggctgatgctgaaaga
cgacaggacattgtcttaagcggtgctcatatcagggaagagcactgtgtattccgcagt
gagaggaatgccaatggagatgtgatcgtcatgctcgtgccctgcgagctttcagaaact
tacgtcaacggcaagcgtgttgagggtgcaatccagcttcgttcaggaaaccgtatcatt
atgggaaagaaccacgtgttccgcttcaaccacccagaacaggccagggctgaaagggag
aaaacaccatctgctgagaccccggtggaaccagtggattggacctttgctcagagagag
cttctggagaagcagggcatcgacatgaagcaggagatggagaaaagactcactgagatg
gaaatcctgtacaaaaaggagaaggaggaagcagaccaacttctggagcaacaaagactg
gtttacgagagcaaattgcaggaacttcagaaacaggttgagactcgttcgctagtggcc
gagacacctgatgaggaagagctggaggaggaggaggaagaggaagtgccgtggactcag
catgagtttgagatggctcaatgggcctttaggaagtggaggttccatcagttcacctcc
ctccgtgaccagctgtggggaaacgccgtctacttgaaggaggccaatgccattagtgtg
gaactaaagaagaaagtccaattccagtttgtcttattgacagacacgctgtactctcca
ctgccccctgagctcctgccgccagaacctgagaaagaacgtgactccaggcctttcccc
cgcaccgtggtggccgtagaggttcaggacctcaagaacggagccacgcactactggtcc
cttgataaactcaagcagaggctggaccagatgagagagatgtatgaccgtgctggagaa
atggcctccgccaaccaggaggatggcgagggctctctgacaggaaatgaccccttctac
gaccgcttccattggtttaaacttgtggggagagctttcgtgtacctgagcaacctgctc
taccctgtaccactggttcaccgtgttgccatagtaacagagaagggtgaggtgcgtggt
ttcctgcgcgtgggggttcaggctatagctgctgacgaggaagccccagactacgggtca
ggagttagacagtcgggaaccgccaagatttctttcgatgatgagtacttcaaaaagaat
gacttcccgtccacggttatgacccgctccggcttgtccctggaagaactgcgcattgtg
gagggtcagggtcagagttcagagatcatcacaccctcagaggagctcaacagaatcact
gacatggatctcaagctgggtaacatcgcagacaccaagctgagctgtggtgatggtctg
gcaggccagctggaggtgggcagcatcttcaccttccgtgttactgtgctccaggccagc
ggcgtcccgcctgagtacgctgacatcttctgccaattcaatttcttgcatcgtcatgac
gaggctttctccaccgagcctctgaagaacaccggcaaaggagcacctctgggcttctac
cacgtccaaaatatttctgtagaggtgacggagtcttttattgagtacatcaagagcaag
cccatcgtctttgaagtgttcggccactaccagcaacacccgctgcatcttcattgccaa
gacctgatcagtccttcaacaccatcaaggaaatactatcctattcctatgcctctgtct
aaaccagttccagccaccaaactaaacaccatcaccaagtccaacctgggtcagtgtgtc
agcaagtacgacctgctggtctggtttgagatcagcgagctggagcccaccggagagtac
atcccagctgtggtggatcacagtggaggactgccttgtcatggcacctacctactgcac
caggggatccagcggaggatcacagtgactctcatccatgagaagggaagtgagctgcac
tggaaggacgttcgtgagctggtcgtgggtcgcatcagaaacaaggctgaagtggacgac
accgctgctgatgccgtcctgtctctcaacatcatttctgccaaaaacatcaagtcatcc
cacaactccaacaggaccttctaccgctttgaggcagtgtgggacagctccctgcacaac
tccctcctgctaaaccgagtcactccttatggagagaagatctacatgactctgtctgca
tatctggagctggaccattgcatccagcctgccattattaccaaagacatctgcatggtt
ttctactcacgagacgcaaagatctcccctcctcgctccctcaggaacctctttgggagt
ggatatgctaaaacccctgactgcaatcgagtcactggcatctacgagctgagcttgtgc
aagatgtctgacactggaagtccaggcatgcagcggaggaggaggaaggtcctggataca
tcagtggcttatgtgcgtggagaagagaacctggctggttggaggcccagaggagacagt
ctcatcctggagcaccaatgggagctagagaaaatggagcagctgcacgaggtggagaag
acccgtcacctgctcctgctgagggagaagctgggagaggctcctccagtgggaacagct
cccaccaccaagtccctgagcgagtcgctgtcccccagcatgagctcaggcaccctgtcc
acctccacctccatttcctcacagatctccagcaccaccttcgaaagcgcaatcacgccc
agcgagagcagcggctacgactccaccgacatcgagagcctggtggatcgtgagaaggag
ctggccactaagtgcctgcgcctcatgacacataccttcaacaatgaatacaaccaggtg
gtcaacagtattagtgactgcaagctctctgacatctcaccaatcggacgcgacccatca
gtgaccagcttcagcagcgccaccctcactccctcttccacctgcccttctctgtctgat
tctcgctgtggctccatgggccagaagaccccagaaaatagctcccgtgcctccagcccc
tcctgctcagactatgaaaacttcccgatggttcccagcctggagacctcttaccttgca
cgtgctgggaagaacgaattcctcaacttggtgcctgatattgaagaaatgaggccagga
tcggtagtgtccaagaagggattcctaagcttcatggagccgcgctccaactcgtgggtg
aagcattttgtggttgtgcgccggccttacgtcttcatctacaacagcgacaaggaccca
gtggagcggggcgtcctcaacctctccacagcgcaggtggaatacagtgaagaccagcag
gccatgctcaagactcccaacacattcgctgtgtgcacaaaacacagaggaatcctcctg
caggccaacaacgagaaagacatgaatgactggctgtacgcgtttaaccctctgctagca
ggaacgataagatctaagttggcaaggaggcgcagcggcctcttgaagaattga
DBGET
integrated database retrieval system
