Scomber scombrus (Atlantic mackerel): 133987913
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Entry
133987913 CDS
T10651
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133987913 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133987913 (ogg1)
Enzymes [BR:
ssco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
133987913 (ogg1)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133987913 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
133987913
NCBI-ProteinID:
XP_062283381
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All DBs
Position
10:20712331..20714891
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AA seq
420 aa
AA seq
DB search
MAKHAVLSSGANMWRRLACAKSELRLDLTLACGQSFRWRETAEGHWTGVIGGRVWTLTQT
DDTLWYHVYKSHHGRPEEGSSSARKKRAGVTLQKEIKSEMSFKGALKKEEEEEPVAVTPL
QDIEEEEEMLRDYFQLNVKLGDLYKEWGAADPHFKHIADIFTGVRMLRQDPTECLFSFIC
TSNNHISRIQGMVERLCQALGVPLCQLDQTSYYNFPSLSALADSSVEACLRELGFGYRAR
FLQQSAKQILDTHGLQWLEGLRGVPYLQARDALRTLPGVGTKVADCACLMSLDKLEAVPV
DTHVWQIAKRDYKYGSGSGQKSITDKLHKDIGDFFRKLWGPYAGWAQSVLFCADLKKFQN
LKEMLHQKKQKKEEDGEGERMVACKKTKRKTEENGTVKNRKTKSACHKSTKKSVKDEKVV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacacgcggtgctgtcatcgggtgcaaacatgtggagacgtctggcctgtgca
aagtcagagctgcgtctggatctcactcttgcctgtggacaatctttccgctggagggag
actgcagagggccactggaccggagtgataggaggacgagtgtggactctgacccagaca
gatgacactctatggtaccacgtttacaaaagccaccacggcaggccggaggagggaagt
tcaagtgccaggaagaagagagctggtgttactctccagaaggaaatcaagtcagagatg
agctttaaaggggctttgaagaaggaagaggaggaggagccggtggctgtgaccccattg
caggacattgaggaggaagaagagatgctgagagattacttccagctgaatgttaaactg
ggggatctgtacaaggagtggggagcagcagacccccacttcaagcatattgcagacatt
ttcactggtgtgcgaatgctacgccaggaccccactgaatgcctgttttccttcatctgc
acctccaacaatcacatctctcgtatccagggcatggttgagcgactgtgtcaggctctg
ggtgtcccactgtgccagctggatcaaacctcttactacaactttccctccctgtctgcg
cttgcagacagcagcgtagaggcctgtctacgggaacttggttttggatacagggctcgg
ttcctgcagcagagtgcgaaacagattctggacacccatgggctccagtggcttgaaggt
ctacgaggtgtcccatatctacaggcccgtgatgctctgcgtactctccctggtgtgggc
accaaggtggcagactgtgcatgtctgatgtccctggataagctagaggccgtgcccgtc
gacacacatgtgtggcagattgcaaagcgtgactacaaatatggttctggcagcggacag
aaaagcatcacagataaacttcacaaagatattggggattttttcagaaagctgtggggt
ccttatgctggttgggcacagtcggtgttgttctgtgctgacctcaagaagttccaaaat
ctgaaagaaatgctgcatcagaagaagcaaaaaaaagaggaagacggtgaaggagagagg
atggtagcatgtaagaaaacaaaaagaaaaacagaagaaaatggaactgtgaaaaacagg
aaaactaagtcagcgtgtcacaagagcacaaagaagtctgttaaggatgagaaggtggtg
tga
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