Scomber scombrus (Atlantic mackerel): 133987950
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Entry
133987950 CDS
T10651
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Cilium and associated proteins [BR:
ssco03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
133987950 (nphp4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133987950
NCBI-ProteinID:
XP_062283428
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Position
10:complement(9244648..9409230)
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AA seq
1450 aa
AA seq
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MADGWREVFESSRLVPPHSQTVRLAADRHSSRSHGFQLSLSRLTTAPRPEEVSDLEQDLT
YQLRVTLFDRNHQHFFGKTWKSPPQKMKNNKISFNEVLYFHTSLQLPSTVVVLELVSLSP
RPDGSQQALGRGFTVLELFTNRPEAQTADGDRRLNLHHGSPRSLLHPLLKDTVDYSSLLK
SIDGAHLICVVKSHPALVTMMQLLPENILVSGDENIPGLAASPAGDALLRPQLLKMLPFT
LNRLTISLQPSLEKFESQLLQLINADCHNTKQPGPEGTARTVVIQERRLHVGVHNGWCFL
ENPQVVVLEPLTSGVRGRADGTSKQSTLTKDSSATSSLPQTLALRSNLELQLTNHQALAV
IFQLEYVFSAPIGRETMLSTTSTPRAAFLQCLRWGIWGPFQDSADWKGEEIQLVLQGGAK
PNPHGVMVYSTEPFAKTPSPVPLSAPGTAQVSEAKDMIMFRLSSSLERKASSPKASLKTK
QEDVSYQRRSPSSPSKGKYHVIPVSPPGSPQGPGLSLSQLAATSRYPTISHSSSALPWQQ
SFPSLLHPSPLASAHQLSHVACSAVTNIAHLEMALQVDKDVSPSAQDEGDQLQELPFTPV
HAPVITLGLNAPSSCSVSSRSSMAHIHSAGFPDILDYSGQVAEVLDPTEPVPFDPQREET
DPLQGDLLVFQFLAFTRIPTAGVGPDWPDNIYFTFQFYRFPPVTSQQLRLLTSDKVQQKA
GDPLPCVMTTINKDGTVNSGSPGLQVQFKVDEGFLRPREKRWFLRYMALHTMHIDIWDSD
SLLLIGSTAIQLKYMLRHGKSAVQALHEVEVLTTDYVGDDTLLASADVGRHSASNPMTVQ
TILRGRLHIRTGNIGCPVDPSRRRAADVMPPPPHIITPRKVTGGFRGGSLCSRNILQLNA
RNAAQAQRLHRDESYVPLSRRGIRADTITPAEHVLNEPDGGRRKLNRMAAVHQREGKEDV
KAPKVTGLSPEARLARELQPIKPCEEHNKTEAISMMLSQAITTQHLLYTSLGSAEYMEFV
LKNPFNVPQTITIHSDDSELSVITNTEEWRYFKALTKTPTSLEENMFHLDKSAPGPRLYL
RPKESIHIPLKYQSFLCDHTMALQGPSFLPSGKGSQMAKKNLSNIVAAKTIKVTFKTDDG
KPVAICQVNVEPTPHVVDQTFRLYHPELCFLKKAIRLPPWHDPTVGDPDTRTHISVRCSD
PNIVCQTRMLVPGEPQDVFLKVPGSPSPHIKMFFVMVFTDKWMAAPSQIWQIYVHFMERV
DISCVTGQRSCQSLVLRGKQAVRKVECFSSHPQEIKVDPEGVFVLPPAAVQELQLKVQPW
RAGSRFLYVNAVDVEHRRLVTAWLLCLSVHRPVLSKAFEVSVPVGGGRGSSRKITYTNPY
TSSRKFLLRSDHPDLLQFKEDKFQIGGGESYTIGLRFAPSQSPGSVEILVYVNNLEEKTE
ETFCVKVSYS
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggctggagagaagtgttcgagagcagccggttggttcccccgcacagccag
acagtccgcctggccgcggatagacactccagccggtcccacggcttccagctcagcctt
agccggctcaccacagctcccaggccggaggaggtgtcagatttggaacaagatctgacg
taccagctgcgagtgaccctgtttgatagaaatcaccagcacttctttgggaaaacatgg
aagagcccaccccagaagatgaaaaacaacaagatctccttcaatgaggtcctgtacttc
cacacgtcgctacagttgcccagcaccgtggtggtcctggagctggtgtcattgtcaccc
aggccagatggctctcagcaggccctggggcgaggcttcactgtcttggagctttttacc
aacaggccagaggctcagactgctgatggggacagaagattgaatctacaccatggatca
ccaaggagcctcctccatcccctgctgaaggacactgttgactacagcagtctcctcaag
agtatcgatggagcacatttgatctgcgtggtgaaaagccatcctgcactggttaccatg
atgcaactccttccagagaatatccttgtgtctggagatgagaacattcctggacttgca
gcctctccagcaggagatgctctgctgaggcctcagctgctcaagatgctgcccttcacc
ctgaacagactgaccatctccctccagccgtccctggagaagtttgagagccagctgctg
cagctgatcaatgcggactgccataacacgaaacagccaggaccagagggtacagcgagg
acagtggtcattcaggaaagaaggctccatgttggggtccacaatggctggtgtttcctt
gagaacccccaagtggtggttctggaacccctaacctcaggagtcagagggcgagcagac
ggcacctccaaacagagcaccctgaccaaagacagctcagcaacatcatcccttcctcag
acgctggctcttcgcagcaacctggagctccagctgaccaatcatcaggctttagcagtc
atcttccaactggaatatgttttctctgctccaatcggtcgggagactatgctgtctacc
acctccacacctcgagcggctttcctacagtgccttcgttgggggatttggggccccttt
caggattcggctgactggaagggggaagagatacagcttgttctgcaaggaggcgcaaag
ccaaaccctcacggagtcatggtctacagcacagaaccgtttgccaaaactccaagccct
gtgccactgtcagcaccgggcacagctcaggtctcggaggcaaaagatatgataatgttt
cggctgtcatccagtctggaaaggaaggcatccagcccgaaggcgtctctgaagacaaag
caggaggatgtgtcatatcagaggagatcaccttcatcaccctcaaagggtaaatatcat
gtaatcccagtttctcctccaggatcacctcaaggccccgggctctcactgtctcagctg
gcagctacttcacgctacccaactatcagccactccagctcagcgttaccgtggcaacag
tcatttccttctctgcttcatccttccccgttggcatcggcccaccagctgtcacatgtc
gcctgctcagctgtcaccaatattgcccacctagaaatggctcttcaggtggacaaggat
gtgtcaccttcagctcaggatgaaggagaccaacttcaggagctgcccttcacccctgtc
cacgctcctgtcatcactcttgggttgaatgcaccaagttcctgctcagtcagctccagg
agctcgatggcccacatccattctgctggcttccctgacatcttggactatagtggccag
gtggcagaagtcctggaccccacagaacccgtgccctttgacccccagcgtgaagagact
gaccctctacagggcgacctgctggtgttccagtttctagcgtttaccagaataccaacg
gcgggggttggtcctgattggcccgacaacatctactttaccttccagttctaccgcttt
ccaccagtcacatcgcagcagctcagacttctgaccagtgacaaggttcagcagaaagct
ggtgatccacttccctgtgtcatgaccaccatcaacaaagacggcactgtcaactccggc
tctccagggctgcaggtgcagttcaaagtagatgagggtttcctgaggcccagagagaag
cgctggttccttcgctacatggccctccacaccatgcacattgacatctgggacagtgac
tcattgctcctcataggttctactgccatccagctcaagtacatgttacgtcacggtaaa
tcggcagtgcaggcacttcatgaggttgaggtgctgaccaccgattacgtgggagacgac
accctgctagcgagtgcagatgtgggccgacactcagcctccaaccccatgacggtccag
actattctcagaggccggctgcacatacgcacaggaaacatagggtgcccagtagatccc
agcaggaggagggcagcagatgtgatgccgcctcctcctcacatcatcacacctcgcaaa
gtcactggtggcttcagaggaggcagcctgtgctccaggaacatcctgcaacttaatgcg
agaaatgcagcacaagcacagaggctgcacagagacgagtcctacgtgccgctgtcgaga
cgggggatcagagctgacaccatcacgcctgcggagcacgtcctaaacgagcctgacggt
gggcgccgcaagctcaaccgcatggctgccgtgcaccagcgtgagggcaaggaagatgtt
aaagcgcctaaggttacgggtttgagtccagaagcccggttggctagagaacttcagccg
atcaaaccatgtgaagaacacaacaagacagaggccatctccatgatgctgagccaggcc
atcaccacccagcacctgctctacaccagcctggggtctgctgagtacatggagtttgtc
ctcaaaaacccctttaatgtaccgcagaccatcaccatccacagtgatgattccgagctc
agtgtcatcactaacacagaggagtggcgttacttcaaagcactaaccaaaactcctacc
tcgctggaggaaaacatgtttcacttggacaagagtgcccctggtcccaggctttacctc
cggcctaaggagagcatccacattcccctgaaataccagagcttcctctgcgaccacacc
atggcccttcagggaccgagcttcctaccttcgggcaaaggttctcagatggccaagaag
aatctatccaatattgttgctgccaaaacaatcaaggttacgttcaaaacagacgacggc
aagccagtggccatctgccaggtcaatgtggagccgacaccccacgttgttgaccagact
ttcagactgtaccaccctgagctgtgtttccttaaaaaggccatccgcctgccgccatgg
cacgaccccacagttggagacccagacaccaggactcacatatccgtacgctgcagtgac
cctaacattgtatgccagacaaggatgctggtgccaggggagcctcaggatgtgttcttg
aaagtgccagggagtcccagtccacacattaaaatgttctttgtgatggtttttactgat
aagtggatggcggcgccctcccagatctggcagatttacgtgcattttatggagcgggtg
gacatcagctgtgtaactggccagaggagctgtcaatcgctggtgttgaggggaaagcaa
gctgttcgcaaggttgaatgtttctcatcacacccccaggagatcaaggtggaccccgag
ggtgtgtttgttttgcctcctgcagcggtgcaggagctccagctgaaggtgcagccatgg
cgggcaggcagccgcttcctgtatgtgaacgcggtggacgttgagcaccggcggcttgtc
accgcctggctgctttgtctcagtgttcaccggcctgtgctgtccaaggcatttgaagtg
agcgtcccagttggtggtggtcgtggcagctccaggaaaatcacctacaccaacccttac
accagcagccgcaaattcctgcttcgctccgaccatccagatctgctccagttcaaagag
gacaaattccagattggaggtggagaaagttacaccatcggactgcgattcgctcccagc
cagagtcccggctcagtggagatcctagtctacgtgaacaacctggaggagaagacggag
gagacgttctgcgtgaaagtcagctactcatga
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