Entry |
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Name |
(RefSeq) LOW QUALITY PROTEIN: complement C3-like
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KO |
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Organism |
ssco Scomber scombrus (Atlantic mackerel)
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Pathway |
ssco04080 | Neuroactive ligand-receptor interaction |
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Brite |
KEGG Orthology (KO) [BR:ssco00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133987954
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133987954
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133987954
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:ssco01002]
133987954
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ssco04131]
133987954
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:ssco04147]
133987954
Peptidases and inhibitors [BR:ssco01002]
Peptidase inhibitors
Family I39: alpha2M family
133987954
Membrane trafficking [BR:ssco04131]
Endocytosis
Phagocytosis
Opsonins
133987954
Exosome [BR:ssco04147]
Exosomal proteins
Exosomal proteins of other cancer cells
133987954
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:11040622..11068501
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AA seq |
1648 aa
MWQTQLWLLAFLAFSSLTPLADGSVLRVMSAPNVLRIGTTENIFVECQDCINDDDIRVKI
RVMTHPTKNRELKATDVTLTKKNKFQGLGQITIPAKDFNKDPNIKQYVFLEAVFPEGVLE
KVVLVSFQSGYIFIQTDKPLYTPSSTINYRIFGVTPGMKPVDRDSATDHFIITEIVTPDG
IILRKGEFSLRSGIHTGEHKLGEIVSTGLWKVVAKFNSNPQQSFYAEFEVKEYVLPSLEV
KLTSQSAYFHVNDKELTITIKAMYLFGKEVDGMAYVVFGVEHVGQKNSFPDSLQRVPILE
GEGEVTLRREHITQIFQDIHELVGRSIYVAVSVLTESGSEMVEAVLKGIQIVTSPYNIQF
KKTPKYFKPGMIFTVSVKVQNPDGTPANGISVVVNPGEVGGRTSESGMAKLPINTQRTSQ
QLEITASTDVDGIDQASATMTIHPYTGKSNNYLHIDVAAADVNLGVNYRFNLVSNREGNV
QKHITYLVLSRSQLVKYGRLSGEWLISASFPITKDMLPSFRIIAYYHVNNNEVVSDSVWV
NVQDSCMGSLKLKPITDPPYRPLNRFELMVTGDPGATVGMVAVDKGVYVLNNEHRLTQKK
IWEIVEKFDTGCTPGGGSDGISVFYDAGLLFESSVASGTPYRQEFKCEAQKRRKRATTIL
DVRTGLVSQYDNELQRDCCLDGMRDTPLSYTCQRRSEYITDGAACVDAFVKCCTELEGQR
AEMKHDILLLARSEDGVEDYKDSNDIVIRSQFPESWLWTPIELPRCSRRNCEKKMSFPLK
DSITTWQFTGISLSSTHGICVSDPLDIIVKKDFFIDLRLPYSAVRGEQLEIKAILHNYIN
ERVTVRVDLIETEHVCSAASKRVRYRQEVSVGSETTRAVPFVIIPMKEGEHSIEVRAAVR
GDRYLSDGIRKMLLVVPEGVLKKNLNIKTLNPAEDGVAGKQEVVMNSNISMTNMVPNSPT
RTDILVSGREQISELVENAISGNSMGTLIKKPGGCGEQNMIRMTLPVIATMYLDKTNQWE
TVGIEKRKAAIEHIKTGYQNELAYRKRDGSFSVFKHHKSSTWLTAYVAKVFAIAYNLVAV
EKSVICDAVRFLILNAQIPDGHFKEVGSIIHGEMIGDVQGAESDVSLTAFCLIAMQESRT
ICEKDVNLPESVSKSVAYLERHLPSLTNPYAVAMTSYALANENKLNRLVLAKFVSSELDH
WPVQRGHLYTLEATAYALLALVKANAFADARPVVRWFTKQQKDGGGYGSTQATIMVYQAV
AEYWASANEEEYDVDVNVDMPNRADSFRYNFNRENHYATKSSKFNNINQDVKVIAMGKGE
VTVKMVSLYYALPEEKESDCQKFDLSVQLIPEKVLEEETIYKLKIEVMYKGDHDATMTIV
DVGLLTGFIFDEKDLKSLSTGRARIISKYEMDTALSERGSLIIYLDKVSHERPQEITFRI
HQKLKVGVMQPAAVTVYEYYNHGNINQSHCVKFYHPKRTGGYLMRLCTNDECTCAEENCS
MQKKEKISNNVRKDKACESTRTTKIEYVYKVSMENFTEGLSTDIYTMRVMNVIKEAKSFD
VIEPNALRIFLGYTHCRPAFDLKKGNTYLIMGTSRDIHVDNQRQEKIYVLGERTWIESWP
TEAECLTEELKPTCDDMEDMLLGVKCHA |
NT seq |
4947 nt +upstreamnt +downstreamnt
atgtggcagacacagctgtggctgctggcctttctggccttttcttccctgactcctctg
gctgatggctctgtattgagggtgatgtctgcccccaacgtgttacggataggaacaaca
gaaaacatttttgtggagtgtcaagattgcataaatgatgatgacatcagggtcaaaatc
agagtaatgacccatccaaccaaaaacagggagctaaaagccacagatgtgacccttact
aagaagaacaaattccagggcctcggacaaattacaatccctgctaaagacttcaataag
gatcccaacataaagcagtatgtattcttagaagctgtgttccctgaaggagtgctggag
aaagtcgtcttggtctccttccagtctggctacatcttcattcagactgataagcccctc
tacacccccagcagcaccatcaactacaggatatttggagtgacacccggcatgaagcct
gtggacagggattctgcaactgatcattttatcatcacagagattgtgacccctgatggc
ataattcttcgaaagggtgaattctctctgcgatcaggaatccacactggagaacacaag
cttggtgaaattgtcagtactggactgtggaaagtggttgcaaaattcaacagcaaccca
cagcagagcttctacgcagagtttgaagtcaaagaatatgttcttcccagtttggaggtg
aaactcacttctcagagcgcttacttccatgtgaatgacaaagagctcaccatcaccatc
aaagctatgtatttgtttggtaaagaggtggatgggatggcctacgtggtattcggggtt
gagcatgttggtcaaaagaacagctttcccgactctcttcagagagtgccgattttggaa
ggtgaaggagaggtcacactgaggagagagcacattacacaaattttccaagatatccat
gagctggttgggagatccatatatgtggcagtcagtgtgctgacagaaagtggtagtgaa
atggtggaggctgtgttgaaaggtatccagattgtcacgtccccttacaacatccagttt
aagaaaacacccaaatatttcaaaccaggaatgatttttactgtttcggtcaaagttcag
aaccccgatggtaccccagcaaatggcatctcagttgtggtgaatccaggagaggtggga
ggcaggacctcagaaagtggcatggcaaagcttcccatcaatacacagcgaacctctcaa
caactggaaataactgcgagcaccgatgtcgatggtattgaccaagcctcagccaccatg
acaattcatccatacaccggcaaaagcaacaactacctccacatagatgtggctgctgct
gatgtaaatttaggagtcaactataggttcaacttagtcagcaacagggagggaaatgta
caaaagcacatcacgtacctggtcctgagcaggagtcagctggttaaatatggcagatta
agcggagaatggctgatttctgcatcatttcccatcaccaaagacatgctgccatcgttc
cgcatcatagcctactaccatgtaaataacaatgaagtggtatcagactctgtttgggtg
aatgtccaggactcctgcatgggctcgttgaaactgaagccaatcacagatccaccatat
aggcctctcaacaggtttgagctgatggtcacaggggacccgggggccacggtgggaatg
gtggcagttgacaaaggcgtctatgttttaaacaatgagcaccgccttacccagaaaaag
atatgggaaatcgtggaaaagtttgatacaggctgcacaccaggtggagggagtgacggc
ataagtgtattttacgatgctgggctgttgtttgagtccagcgtggcttctgggacaccc
tacagacaagaatttaaatgtgaggcccagaagaggagaaaacgagccacaactatactg
gacgtcagaacaggcttagtgagtcagtatgacaatgagctgcaacgtgactgttgtttg
gacggcatgagagacacccccctctcatacacctgtcagagacggagcgaatacatcact
gacggtgcagcctgtgttgatgcctttgtgaaatgctgcaccgagctggaaggccagcga
gctgagatgaagcatgacatcctcctattggctcgaagtgaggacggtgttgaagattac
aaggacagcaatgatattgtcattcgtagccaattccctgaaagttggctgtggacacct
attgaactgcctagatgttctcgacgtaactgtgaaaaaaagatgagcttccccttgaaa
gactctatcacgacctggcagttcaccggtatcagcctgtccagtactcatggtatctgt
gtgtccgacccattagatataattgtgaagaaggacttcttcattgatctcaggctgcct
tattctgccgtccgtggagagcagctggaaattaaggcaatcctccacaactacatcaat
gaacgggtcactgtgcgtgtggatctgattgagacggagcatgtgtgcagtgcagcctca
aagcgcgtgaggtatcgccaggaagtcagtgttgggagtgaaactacacgagctgtaccc
ttcgtcattattcccatgaaggagggagaacacagcattgaggtccgagcagctgttaga
ggagatcgttatcttagtgatggaatcaggaagatgcttttggtggtgcctgaaggcgta
ctgaaaaaaaatttaaatataaaaacccttaaccctgctgaggatggtgtagctggcaaa
caagaagtagttatgaacagtaacatttctatgacaaatatggttccaaacagccctact
aggacagacatccttgtgtcaggaagagagcagataagtgaactggtggagaatgcgatt
agtgggaactcaatgggtactctaatcaaaaagcccggtggctgtggagagcagaacatg
atcaggatgactctgcctgttattgcaaccatgtatttggataaaaccaaccagtgggaa
actgtgggcattgagaaacgtaaagcagccattgaacacatcaagactggctatcagaac
gagcttgcttaccgtaagagggatggttctttttctgtgttcaagcatcataagagcagc
acctggctgacagcctatgttgccaaggtgtttgctattgcctacaatctggttgcagtg
gaaaagagcgtgatctgtgacgctgtcaggtttctaattctcaacgcacagatccctgat
ggccattttaaagaagttggatcaattatccatggagagatgattggtgatgtgcagggc
gcagaatcagatgtgtccttgacagccttctgcctcattgctatgcaggaatcacgcaca
atatgtgaaaaagatgttaatctgccagaaagtgtaagcaaatcagtggcctacttggag
aggcatctgcccagcctcaccaacccatatgctgttgccatgacatcatatgccctggcc
aatgaaaacaaactgaaccggcttgtcctcgccaaatttgtctcctcagaattagatcac
tggcctgtacaaagggggcatctctacaccctggaggccacagcttatgctcttctggct
ctggtcaaggccaatgcttttgcagatgccagacccgttgtcagatggttcaccaaacag
caaaaagacggtggaggctatggatcaactcaggctaccataatggtataccaggcagta
gctgagtactgggccagtgctaacgaagaggagtatgatgtggatgttaatgttgacatg
ccaaacagggcagactcctttcgctataacttcaacagggaaaaccactacgccactaaa
tcatctaagttcaataacataaaccaagatgtgaaagttattgccatgggaaaaggagaa
gtaacagtgaaaatggtatcactgtattacgctctgcctgaagaaaaggagagtgactgt
cagaagtttgacctgtctgtgcagcttatcccagagaaagttcttgaggaagagacgata
tacaagctgaaaatagaggttatgtataagggtgatcatgatgcaaccatgacaattgtg
gatgttggcttgctaacaggctttatttttgatgaaaaagacctgaaatcgttgtccacc
ggacgtgcccgcatcatttcaaaatatgagatggacacagccctgtcagaaagaggctcg
ctcatcatctacctggacaaggtttctcacgaacgaccacaggagatcacttttaggatc
catcagaagctgaaagtgggtgtcatgcaaccagctgctgttactgtctatgaatactac
aaccatggaaacataaaccagtcacattgtgtgaaattctaccacccaaagaggactggt
ggatacctaatgaggctctgtacaaatgatgaatgcacatgtgctgaagagaactgcagt
atgcagaagaaggaaaaaatcagcaacaatgtgcgaaaagataaggcttgcgaaagtaca
cggaccaccaaaatagagtatgtgtacaaagtaagcatggagaactttacagagggtttg
tctactgatatttacacaatgcgggttatgaatgtcatcaaagaagccaaaagctttgat
gtgattgaaccaaatgcactgcgcatattcctcggttatacacactgcagaccagctttt
gatctgaaaaaaggcaatacctacctcataatgggcacatccagagatattcatgtagac
aaccagagacaggagaaaatatatgtgcttggtgaacgaacctggattgagtcctggccc
acagaagcagagtgtctgactgaggaactcaaacctacttgtgatgatatggaggatatg
ctcctgggggtcaaatgtcatgcttag |