KEGG   Scomber scombrus (Atlantic mackerel): 133987954
Entry
133987954         CDS       T10651                                 
Name
(RefSeq) LOW QUALITY PROTEIN: complement C3-like
  KO
K03990  complement component 3
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080  Neuroactive ligand-receptor interaction
ssco04145  Phagosome
ssco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    133987954
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    133987954
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    133987954
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssco01002]
    133987954
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133987954
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    133987954
Peptidases and inhibitors [BR:ssco01002]
 Peptidase inhibitors
  Family I39: alpha2M family
   133987954
Membrane trafficking [BR:ssco04131]
 Endocytosis
  Phagocytosis
   Opsonins
    133987954
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   133987954
SSDB
Motif
Pfam: TED_complement MG1 A2M_BRD A2M A2M_recep NTR MG4 MG3 MG2 ANATO C3_CUB2 Transglut_C
Other DBs
NCBI-GeneID: 133987954
NCBI-ProteinID: XP_062283436
LinkDB
Position
2:11040622..11068501
AA seq 1648 aa
MWQTQLWLLAFLAFSSLTPLADGSVLRVMSAPNVLRIGTTENIFVECQDCINDDDIRVKI
RVMTHPTKNRELKATDVTLTKKNKFQGLGQITIPAKDFNKDPNIKQYVFLEAVFPEGVLE
KVVLVSFQSGYIFIQTDKPLYTPSSTINYRIFGVTPGMKPVDRDSATDHFIITEIVTPDG
IILRKGEFSLRSGIHTGEHKLGEIVSTGLWKVVAKFNSNPQQSFYAEFEVKEYVLPSLEV
KLTSQSAYFHVNDKELTITIKAMYLFGKEVDGMAYVVFGVEHVGQKNSFPDSLQRVPILE
GEGEVTLRREHITQIFQDIHELVGRSIYVAVSVLTESGSEMVEAVLKGIQIVTSPYNIQF
KKTPKYFKPGMIFTVSVKVQNPDGTPANGISVVVNPGEVGGRTSESGMAKLPINTQRTSQ
QLEITASTDVDGIDQASATMTIHPYTGKSNNYLHIDVAAADVNLGVNYRFNLVSNREGNV
QKHITYLVLSRSQLVKYGRLSGEWLISASFPITKDMLPSFRIIAYYHVNNNEVVSDSVWV
NVQDSCMGSLKLKPITDPPYRPLNRFELMVTGDPGATVGMVAVDKGVYVLNNEHRLTQKK
IWEIVEKFDTGCTPGGGSDGISVFYDAGLLFESSVASGTPYRQEFKCEAQKRRKRATTIL
DVRTGLVSQYDNELQRDCCLDGMRDTPLSYTCQRRSEYITDGAACVDAFVKCCTELEGQR
AEMKHDILLLARSEDGVEDYKDSNDIVIRSQFPESWLWTPIELPRCSRRNCEKKMSFPLK
DSITTWQFTGISLSSTHGICVSDPLDIIVKKDFFIDLRLPYSAVRGEQLEIKAILHNYIN
ERVTVRVDLIETEHVCSAASKRVRYRQEVSVGSETTRAVPFVIIPMKEGEHSIEVRAAVR
GDRYLSDGIRKMLLVVPEGVLKKNLNIKTLNPAEDGVAGKQEVVMNSNISMTNMVPNSPT
RTDILVSGREQISELVENAISGNSMGTLIKKPGGCGEQNMIRMTLPVIATMYLDKTNQWE
TVGIEKRKAAIEHIKTGYQNELAYRKRDGSFSVFKHHKSSTWLTAYVAKVFAIAYNLVAV
EKSVICDAVRFLILNAQIPDGHFKEVGSIIHGEMIGDVQGAESDVSLTAFCLIAMQESRT
ICEKDVNLPESVSKSVAYLERHLPSLTNPYAVAMTSYALANENKLNRLVLAKFVSSELDH
WPVQRGHLYTLEATAYALLALVKANAFADARPVVRWFTKQQKDGGGYGSTQATIMVYQAV
AEYWASANEEEYDVDVNVDMPNRADSFRYNFNRENHYATKSSKFNNINQDVKVIAMGKGE
VTVKMVSLYYALPEEKESDCQKFDLSVQLIPEKVLEEETIYKLKIEVMYKGDHDATMTIV
DVGLLTGFIFDEKDLKSLSTGRARIISKYEMDTALSERGSLIIYLDKVSHERPQEITFRI
HQKLKVGVMQPAAVTVYEYYNHGNINQSHCVKFYHPKRTGGYLMRLCTNDECTCAEENCS
MQKKEKISNNVRKDKACESTRTTKIEYVYKVSMENFTEGLSTDIYTMRVMNVIKEAKSFD
VIEPNALRIFLGYTHCRPAFDLKKGNTYLIMGTSRDIHVDNQRQEKIYVLGERTWIESWP
TEAECLTEELKPTCDDMEDMLLGVKCHA
NT seq 4947 nt   +upstreamnt  +downstreamnt
atgtggcagacacagctgtggctgctggcctttctggccttttcttccctgactcctctg
gctgatggctctgtattgagggtgatgtctgcccccaacgtgttacggataggaacaaca
gaaaacatttttgtggagtgtcaagattgcataaatgatgatgacatcagggtcaaaatc
agagtaatgacccatccaaccaaaaacagggagctaaaagccacagatgtgacccttact
aagaagaacaaattccagggcctcggacaaattacaatccctgctaaagacttcaataag
gatcccaacataaagcagtatgtattcttagaagctgtgttccctgaaggagtgctggag
aaagtcgtcttggtctccttccagtctggctacatcttcattcagactgataagcccctc
tacacccccagcagcaccatcaactacaggatatttggagtgacacccggcatgaagcct
gtggacagggattctgcaactgatcattttatcatcacagagattgtgacccctgatggc
ataattcttcgaaagggtgaattctctctgcgatcaggaatccacactggagaacacaag
cttggtgaaattgtcagtactggactgtggaaagtggttgcaaaattcaacagcaaccca
cagcagagcttctacgcagagtttgaagtcaaagaatatgttcttcccagtttggaggtg
aaactcacttctcagagcgcttacttccatgtgaatgacaaagagctcaccatcaccatc
aaagctatgtatttgtttggtaaagaggtggatgggatggcctacgtggtattcggggtt
gagcatgttggtcaaaagaacagctttcccgactctcttcagagagtgccgattttggaa
ggtgaaggagaggtcacactgaggagagagcacattacacaaattttccaagatatccat
gagctggttgggagatccatatatgtggcagtcagtgtgctgacagaaagtggtagtgaa
atggtggaggctgtgttgaaaggtatccagattgtcacgtccccttacaacatccagttt
aagaaaacacccaaatatttcaaaccaggaatgatttttactgtttcggtcaaagttcag
aaccccgatggtaccccagcaaatggcatctcagttgtggtgaatccaggagaggtggga
ggcaggacctcagaaagtggcatggcaaagcttcccatcaatacacagcgaacctctcaa
caactggaaataactgcgagcaccgatgtcgatggtattgaccaagcctcagccaccatg
acaattcatccatacaccggcaaaagcaacaactacctccacatagatgtggctgctgct
gatgtaaatttaggagtcaactataggttcaacttagtcagcaacagggagggaaatgta
caaaagcacatcacgtacctggtcctgagcaggagtcagctggttaaatatggcagatta
agcggagaatggctgatttctgcatcatttcccatcaccaaagacatgctgccatcgttc
cgcatcatagcctactaccatgtaaataacaatgaagtggtatcagactctgtttgggtg
aatgtccaggactcctgcatgggctcgttgaaactgaagccaatcacagatccaccatat
aggcctctcaacaggtttgagctgatggtcacaggggacccgggggccacggtgggaatg
gtggcagttgacaaaggcgtctatgttttaaacaatgagcaccgccttacccagaaaaag
atatgggaaatcgtggaaaagtttgatacaggctgcacaccaggtggagggagtgacggc
ataagtgtattttacgatgctgggctgttgtttgagtccagcgtggcttctgggacaccc
tacagacaagaatttaaatgtgaggcccagaagaggagaaaacgagccacaactatactg
gacgtcagaacaggcttagtgagtcagtatgacaatgagctgcaacgtgactgttgtttg
gacggcatgagagacacccccctctcatacacctgtcagagacggagcgaatacatcact
gacggtgcagcctgtgttgatgcctttgtgaaatgctgcaccgagctggaaggccagcga
gctgagatgaagcatgacatcctcctattggctcgaagtgaggacggtgttgaagattac
aaggacagcaatgatattgtcattcgtagccaattccctgaaagttggctgtggacacct
attgaactgcctagatgttctcgacgtaactgtgaaaaaaagatgagcttccccttgaaa
gactctatcacgacctggcagttcaccggtatcagcctgtccagtactcatggtatctgt
gtgtccgacccattagatataattgtgaagaaggacttcttcattgatctcaggctgcct
tattctgccgtccgtggagagcagctggaaattaaggcaatcctccacaactacatcaat
gaacgggtcactgtgcgtgtggatctgattgagacggagcatgtgtgcagtgcagcctca
aagcgcgtgaggtatcgccaggaagtcagtgttgggagtgaaactacacgagctgtaccc
ttcgtcattattcccatgaaggagggagaacacagcattgaggtccgagcagctgttaga
ggagatcgttatcttagtgatggaatcaggaagatgcttttggtggtgcctgaaggcgta
ctgaaaaaaaatttaaatataaaaacccttaaccctgctgaggatggtgtagctggcaaa
caagaagtagttatgaacagtaacatttctatgacaaatatggttccaaacagccctact
aggacagacatccttgtgtcaggaagagagcagataagtgaactggtggagaatgcgatt
agtgggaactcaatgggtactctaatcaaaaagcccggtggctgtggagagcagaacatg
atcaggatgactctgcctgttattgcaaccatgtatttggataaaaccaaccagtgggaa
actgtgggcattgagaaacgtaaagcagccattgaacacatcaagactggctatcagaac
gagcttgcttaccgtaagagggatggttctttttctgtgttcaagcatcataagagcagc
acctggctgacagcctatgttgccaaggtgtttgctattgcctacaatctggttgcagtg
gaaaagagcgtgatctgtgacgctgtcaggtttctaattctcaacgcacagatccctgat
ggccattttaaagaagttggatcaattatccatggagagatgattggtgatgtgcagggc
gcagaatcagatgtgtccttgacagccttctgcctcattgctatgcaggaatcacgcaca
atatgtgaaaaagatgttaatctgccagaaagtgtaagcaaatcagtggcctacttggag
aggcatctgcccagcctcaccaacccatatgctgttgccatgacatcatatgccctggcc
aatgaaaacaaactgaaccggcttgtcctcgccaaatttgtctcctcagaattagatcac
tggcctgtacaaagggggcatctctacaccctggaggccacagcttatgctcttctggct
ctggtcaaggccaatgcttttgcagatgccagacccgttgtcagatggttcaccaaacag
caaaaagacggtggaggctatggatcaactcaggctaccataatggtataccaggcagta
gctgagtactgggccagtgctaacgaagaggagtatgatgtggatgttaatgttgacatg
ccaaacagggcagactcctttcgctataacttcaacagggaaaaccactacgccactaaa
tcatctaagttcaataacataaaccaagatgtgaaagttattgccatgggaaaaggagaa
gtaacagtgaaaatggtatcactgtattacgctctgcctgaagaaaaggagagtgactgt
cagaagtttgacctgtctgtgcagcttatcccagagaaagttcttgaggaagagacgata
tacaagctgaaaatagaggttatgtataagggtgatcatgatgcaaccatgacaattgtg
gatgttggcttgctaacaggctttatttttgatgaaaaagacctgaaatcgttgtccacc
ggacgtgcccgcatcatttcaaaatatgagatggacacagccctgtcagaaagaggctcg
ctcatcatctacctggacaaggtttctcacgaacgaccacaggagatcacttttaggatc
catcagaagctgaaagtgggtgtcatgcaaccagctgctgttactgtctatgaatactac
aaccatggaaacataaaccagtcacattgtgtgaaattctaccacccaaagaggactggt
ggatacctaatgaggctctgtacaaatgatgaatgcacatgtgctgaagagaactgcagt
atgcagaagaaggaaaaaatcagcaacaatgtgcgaaaagataaggcttgcgaaagtaca
cggaccaccaaaatagagtatgtgtacaaagtaagcatggagaactttacagagggtttg
tctactgatatttacacaatgcgggttatgaatgtcatcaaagaagccaaaagctttgat
gtgattgaaccaaatgcactgcgcatattcctcggttatacacactgcagaccagctttt
gatctgaaaaaaggcaatacctacctcataatgggcacatccagagatattcatgtagac
aaccagagacaggagaaaatatatgtgcttggtgaacgaacctggattgagtcctggccc
acagaagcagagtgtctgactgaggaactcaaacctacttgtgatgatatggaggatatg
ctcctgggggtcaaatgtcatgcttag

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