Scomber scombrus (Atlantic mackerel): 133987965
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Entry
133987965 CDS
T10651
Name
(RefSeq) putative helicase mov-10-B.1 isoform X1
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133987965
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987965
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
133987965
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133987965
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
133987965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_Ig-like
AAA_12
AAA_11
MOV-10_beta-barrel
Mov-10_helical
MOV-10_N
AAA_30
AAA_19
AAA_22
ResIII
UvrD-helicase
AAA_16
Cep192_D4
AAA_7
T2SSE
NPHP3_N
Transcrip_act
ATPase_2
SLFN-g3_helicase
UvrD_C_2
AAA
HYDIN_VesB_CFA65-like_Ig
Motif
Other DBs
NCBI-GeneID:
133987965
NCBI-ProteinID:
XP_062283445
LinkDB
All DBs
Position
10:complement(16816223..16825811)
Genome browser
AA seq
1101 aa
AA seq
DB search
MGKKIKKSVLCQIGLDFFEFLAESDRASTTNRIELRDIYNDEFRARNAGTRDPNFGSVLY
GLKVCNKVTRKGDTIRFNSTVKALYLDQWHSPRDRQPVRTQNGAASPGPVETYPSAEDAA
TGVRARRKLASSLMNKLKMDRAQFISDKHGVSIRSDHQFEDGKLCLCVETTSEYVVNLTV
ENTGTKPVHFTYYTPLHWLRYFSLNDERRVTKTNPLTLNPGDGYEIQIRFHCTLVGFYPA
TLAFEFQPDMQSSTAFHIVRFIEAQCMTHLGRELAPIAPYKPRSLPAVIPETYCTIVEGQ
RPEGLSVIKLKNEVELKKYKIPPYMNQLIQSLKKGTHLNDRRITLLECPLTWENYSERFQ
LLLYLEELQMEVDIRRYNIPNNDGEYAPMYRDPNNKKLLIVEVPGVSENRPSVLRGDKLL
VYPEGEKGVKYSGYVHSVQLDSVKLGFGSELLDRFIDGMTFNVEFTVNRLTLRVQHRAAE
LAATYRLKEVLFPAAHTSFCQQPELPKLRLFDSQLERNPEQYQAVQHIVAGSSRPAPYLV
FGPPGTGKTVTLVEAIKQIEKSQTSCHILACAPSNSAADLLCKKILDHVDGHKVYRMYAS
SREPKFVPHELKACSNLVGECYEYPAKEKLMEYRILVTTLLTAGRLVTGNIPVGHFTHVF
VDEAGHAVETECLVPLAGLLSAESGQVVLAGDPKQLGPILRSPFVLKYGMGVSLLERMMN
DFPLYQKDEDVFNKRFVTKLLRNYRSHPAILKIPNELFYDGELQVCADEMLRNSYCNWEY
LPRRDFPVIFHGVTGLDEREASSPSFFNIAEVEVLMDYVKKLLATQAKKGLAVIRPRDIG
IIAPYRKQVQKIRKALQKVGKDLKRVDMDTLKVGSVEEFQGQERRVILVSTVRSSREYVE
TDKQFNLGFVKNEKRFNVAVTRAKALLIVVGNPRVLNADPVWARFIQYCRDEGGYTGFVQ
AEEDEDVVWRLTRVSSSSSLTPSGGMTCEEEETSCLEHLNRLIMLYVCSQISILVKSLQK
GLSDTFLSLVHKNILTSVYNLFHVNYGYFTKDHEGQSRLFVLDYFGPFQLDQFRSTQLQM
PLLLLSVQVTLRHRPEPSVFN
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagattaagaaatctgtactctgccaaattggactcgacttctttgagttt
ttggcggaaagtgatcgagcatccaccactaatagaattgaactcagagacatttacaac
gatgagttcagagccaggaatgcaggaaccagagatccaaactttggttcagtcctttat
ggcctgaaagtctgtaacaaagtaacgagaaaaggagacactattcgcttcaactctaca
gtcaaagctctgtatctggaccagtggcactcaccccgggaccgtcagccagtgcggacc
cagaatggagcagccagtcccgggccagtagagacctatccctcagcagaagacgcagcg
acaggggttcgagccaggaggaaactggccagttcattgatgaacaagctcaagatggac
agggctcagttcatttctgacaaacatggtgtcagcatcaggtccgaccatcagtttgag
gacgggaaactttgcttgtgtgtggaaaccacatctgagtatgtggtaaatctgactgtg
gaaaacacgggaacaaaacctgtgcatttcacctactacaccccgctgcactggctcaga
tacttctctctaaatgatgaacgcagagtgaccaagacaaaccctctcacattaaaccca
ggtgatggctatgagatccagattcgattccactgcactttggttggtttctatccagcc
acactggcctttgagtttcaaccagacatgcagtcctccactgcattccacattgtacgc
tttattgaggctcaatgtatgacccacttaggacgggagcttgcacctatagccccttac
aaacctcgctcccttcctgccgttatccctgaaacttactgcacgattgtagaagggcag
cgacctgaagggctctctgtgattaagctaaaaaatgaagttgagctaaaaaagtacaaa
ataccaccatatatgaaccagctcatccagtcactgaagaagggtactcacttaaacgat
agaagaatcaccttgcttgaatgtcccttgacctgggagaattactcagagaggttccag
ctgctgctgtatctggaggagcttcagatggaggtggacatcaggagatacaacatcccc
aacaatgatggagaatatgcccccatgtacagagatccaaacaacaagaaacttctcatt
gtggaggtacctggtgtgtctgagaatcgtccgtctgtgctacgaggcgataaactgctt
gtgtatcctgaaggagagaaaggggtgaagtacagcggctatgtccacagtgtacagctg
gacagtgtcaaactgggctttggatcagaattgttggatcgctttatagatgggatgacg
ttcaatgtcgagttcactgtcaaccgccttactctgcgtgttcagcacagagcagcagag
ctggcagctacatacagactgaaagaggtgttgtttcctgctgcacacacatccttctgt
cagcaacctgagcttcccaaactcaggctgtttgactctcagctggagagaaacccagag
cagtatcaagctgtgcaacacattgtagctggctcatccagacctgctccttacctggtg
tttggccctcctggaacaggcaaaacagtgactctggtggaggccatcaaacagatagag
aagagtcagacctcctgccacatcctggcctgtgctccctcaaacagcgctgctgatttg
ctctgcaagaagattctggaccatgtggacgggcataaagtgtaccgcatgtatgccagc
agccgggaaccaaagtttgtccctcatgaattaaaggcatgctctaacctggtaggggag
tgttacgaatatcctgctaaagagaagctgatggagtacaggattctggttaccaccctg
ttaactgctggaaggctggtcacaggaaacattcctgtcggacatttcactcacgtgttt
gtggatgaggcaggacacgctgtggagaccgaatgcttagtcccactggcagggctgctc
tctgcagagtctggtcaggttgttctggctggggaccccaagcagctgggacctattctc
agatccccttttgtgctgaaatacggcatgggagtgtccctcttggaacggatgatgaat
gattttcctctataccagaaggatgaggatgtgttcaacaagcgctttgtcaccaaactg
ctgcgcaactacaggtcccatcctgccattctgaagattcccaacgagctcttctatgac
ggagagctccaggtctgtgcggatgaaatgttacgcaactcctactgcaattgggaatac
ctcccacggagggatttcccagtaatttttcatggggtgacgggcctcgatgagcgtgag
gccagcagtccttcgttcttcaacatagcagaggtggaggtgctgatggactatgtgaag
aaactgctggcaacacaagcaaagaagggcctggctgtgatcaggcctcgagacataggc
atcattgccccctacaggaaacaggtgcagaaaatccgtaaggccctgcaaaaagttggg
aaagaccttaaacgtgtggacatggatactctcaaggttggttcagtggaggagttccaa
ggtcaggagaggagagtgatcttggtgtctacagttcggagcagccgcgaatacgtagag
acagacaaacagttcaacctcggctttgtcaagaatgagaagaggttcaatgtggctgtg
actcgagctaaagcccttctaattgtggtgggaaaccccagagtgctgaacgcagatcct
gtctgggcccggttcatccagtactgtagagatgagggaggctacacaggatttgtacag
gcagaggaagacgaggacgtggtgtggagactgacgagagtgtcgtccagcagctccttg
accccgagtggaggaatgacctgtgaggaagaggagacctcctgcctggaacacttgaat
aggctgattatgctttatgtttgtagtcaaatatcaattttagtcaagtctctacaaaaa
gggcttagtgacacctttctgtcacttgtacataaaaatatcttaacatcggtttataat
ctttttcatgtcaattatggatactttaccaaagaccatgaaggacagagcagactgttt
gttttggactactttggaccgtttcagctggatcagtttcgttcaacacaactgcaaatg
ccactgttactgttatcagttcaagtcactctgagacaccgtcccgaaccttcagttttt
aactga
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integrated database retrieval system
