Scomber scombrus (Atlantic mackerel): 133988056
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Entry
133988056 CDS
T10651
Name
(RefSeq) zinc finger and BTB domain-containing protein 39
KO
K10511
zinc finger and BTB domain-containing protein 39
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133988056
04121 Ubiquitin system [BR:
ssco04121
]
133988056
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
133988056
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
133988056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-C2H2_ZNF462_1st
Phage_zn_bind_3
zf-met
Mak10
Motif
Other DBs
NCBI-GeneID:
133988056
NCBI-ProteinID:
XP_062283567
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All DBs
Position
10:complement(27106422..27111765)
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AA seq
873 aa
AA seq
DB search
MRIRLQGPGHAASLLTELNRCRQSRHYCDVFLQVGNRTFAAHRAVLACAGTYFRNLFARA
PTASTTAFSLEFISPANFEKVLTFVYTGDILTDLIDVGVLYELAERLGVSELVKACHATF
PDLQASVSASSKASSPRDLLDSSMVAVAAAASTVAAVSAASVSAPSVCSSAASCSSLSSS
AGPSAAPTPAAAASPLFQARAARTVREAHSGALSLDLKAEDLQSHIGYGHMAADHTLTSS
HSTQSDGVLPQGPVLQLKTEQGLEEEEEEGTGGSCEEGGRDGRMMVSESVGSSLPRSSDP
TPSDSCSFPDSSAQLGTEACAPTSSSGEPIGSLQVGAVEGGVVDVHRDGRLMFGEVEEGE
NDEEREVLQGNGTMEGTEEEQWRQLAGEIIELSDDENFMEEADEEDDEDDLVCVENGEGG
NSSHQMACNMLSCKACAAPLPADPAAIRRHGESHLTELGLCRVCGASFPDRAAGVTHSLT
HVGVQLFTCEMCHLQFCSQNKLLRHHRQTASSYTLPQGALTNSGQGQSIELQCAVCTKTL
SKDFQTVRDHLLSHVCPQSLSCGVCHLPQLSLCSLLWHALAHLSLPVFTCPHCARCFVER
HMLDRHMTAHAEEAAAKERERSVLRAYRVGADGVMGGGGGGGMVGMEELHCFLCPQTFRS
SSAFQYHLSLHTTESLGGGGGVMGQSWLGKRKADQSLECPPSSCSSSSPGGLAKMSNLGL
GVGMGFGLTDKFFHGPTHSLTSGVLTNGSSGQDGGVGAVGVRGKWYRCRYCGKRFAHSGE
FTYHLRIHTGEKPYQCKVCLRFFRGRSTMICHLKTHAGALMYRCTVCGLYFSTLKLVSSH
MELHKDHLPPDFNIEQTFMYNDHSKEPLPTVDT
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaggatccggctgcagggtcctggccacgctgccagccttctcactgagctcaaccgc
tgccgccaatcccgccattactgtgatgtgttcctccaggtcggcaaccgcacatttgca
gctcaccgtgctgtgctggcctgcgccgggacgtacttccgcaacctgtttgcccgggcg
ccgaccgcctccaccaccgccttctctttggagtttatatccccggctaactttgagaag
gtgctgactttcgtctacacgggggacatcctgaccgatctcatagatgtcggggttctg
tacgagctggctgagaggttgggggtcagtgaactggtgaaggcctgtcacgccaccttc
cctgatctgcaggcgtctgtgtcagcgagcagtaaagccagcagtcccagagacctcctg
gattcaagcatggttgccgtcgccgctgctgcttccacggtggctgctgtcagcgctgct
tcagtatctgcgccgtccgtgtgttcctctgccgcctcctgctcctctctgtcttcatca
gctggtccgtctgccgccccgacccctgctgccgctgcctcgcctctcttccaagccagg
gcagccaggacggtccgtgaagctcacagcggggctctgtctcttgatctgaaggcagaa
gacctccagtctcatataggctatgggcatatggcagcagatcatactttaaccagcagc
cactccactcagagtgacggcgtgctgcctcaggggcctgtgctgcagctgaagactgag
caagggctggaagaggaggaggaggagggtacaggaggcagctgtgaggaaggtggcaga
gatggacggatgatggtttctgagagcgtgggcagctctttgccccggagcagcgacccc
acgccgtctgactcctgctccttccccgactcttcggctcagctcggaacggaggcctgc
gccccgacgtcgtcctcaggagagccgattggcagcctgcaggtgggagcggtggagggc
ggcgtggtggacgtgcacagagacggcaggctgatgtttggagaggtggaggaaggagag
aatgacgaggagagggaggtgctgcaaggaaacggtacgatggagggcacagaggaagag
cagtggaggcagctggcaggcgagatcatcgagctgagcgacgatgagaacttcatggag
gaggcagacgaagaggatgatgaagatgaccttgtgtgtgtggagaacggagagggaggg
aactcaagccaccagatggcgtgcaacatgctgtcctgtaaagcctgcgctgcgcctctt
cctgcggatccggcagccatcagacgacacggcgagagccacctgacggagctggggctg
tgcagagtgtgcggggcctcgttcccggaccgagcagccggggtcacccactccctcacc
cacgtgggcgtgcagctcttcacctgtgagatgtgccacctgcagttctgcagccaaaac
aaactgctgcgtcaccaccgtcagacagcttctagctacacgctgccgcagggggcgctg
accaacagcggccagggtcagagcatcgagctgcagtgtgccgtgtgcaccaaaaccctc
agcaaggacttccagaccgttagagaccacctgttgagccacgtgtgtcctcagagcctg
agctgcggcgtgtgtcacctcccccagctctccctgtgctccctgctgtggcacgccctc
gcccacctctccctgcccgtcttcacctgcccacactgcgcccgttgcttcgtagagcgc
cacatgctggacagacacatgaccgcgcacgctgaggaggcggcggcgaaggaaagggag
cgctcggtgctgagggcttatagagtcggggcagatggagtcatgggaggaggaggagga
ggaggtatggtgggaatggaggagctgcattgcttcctttgcccacagactttccgctcc
tcctctgcttttcagtaccacctcagcctgcacaccaccgagtccctggggggtggagga
ggtgtcatgggtcagagctggttgggtaaacgtaaagccgatcagtctctggaatgccct
ccgtcttcctgctcctcctcttctcctggcggcctcgcgaaaatgagcaaccttggtttg
ggtgtgggaatgggcttcggcttaacagataagttttttcatgggccaacacacagcttg
acctccggggtcctcacaaacgggagctctgggcaggacgggggagtcggagctgtgggc
gttcgtgggaaatggtaccgatgtcgctactgcgggaagcgtttcgcccactcgggggag
ttcacctatcacctccgtatccacaccggggagaaaccctaccagtgcaaagtctgcctg
cgcttcttcagaggccgctccaccatgatctgccacctgaagacgcacgccggcgctctg
atgtaccgctgcaccgtctgcggcctttacttctccacgctgaagctggtgtcgtcacat
atggagctccacaaggaccacctgcctccggacttcaacatcgagcagaccttcatgtac
aatgatcactctaaagaaccgctgcccactgtggacacctga
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