Scomber scombrus (Atlantic mackerel): 133988122
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Entry
133988122 CDS
T10651
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04020
Calcium signaling pathway
ssco04148
Efferocytosis
ssco04218
Cellular senescence
ssco04310
Wnt signaling pathway
ssco04370
VEGF signaling pathway
ssco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133988122 (nfatc2a)
04370 VEGF signaling pathway
133988122 (nfatc2a)
04020 Calcium signaling pathway
133988122 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133988122 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
133988122 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133988122 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133988122 (nfatc2a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
133988122 (nfatc2a)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
133988122
NCBI-ProteinID:
XP_062283658
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All DBs
Position
10:complement(27784786..27803869)
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AA seq
898 aa
AA seq
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MTSFYDEKDLEEELSRVNCPDEDLEFEYLFEYEPPCSDFAGGHQDDPNLASHKVLSPQSE
QAFPLEEASPYGIKSCSPSYSEHNTEVLPGYDNQEARNYLDSTRPAGLALSPRIEITPSL
PYNHGRDSLQNHQLNISPRPTLTVPGHDNLAYREPQCLSPASSNSSTSWHSENYSPWASP
CVSPSSGQNPGDLCPRLQNIHTGSPRTSPGTSPRTSLAEDGCLGPRSPSSRPGSRSTSPQ
GKRTYDMYRNPALVPGHRSRSPSPHSGHEDHNIGAHYQHNTLVEAINGFGTNQPGLVPTK
IVKTSNQVYTLYPENHGEGNFLVSCEQDMKPKPATEPYFVIPQIWPKPLVSSFCSIPVAS
LPPLEWPMPTRTEQYDLHIDVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHGYRGKEP
LGLQIFIGTADERILKPHAFYQVHRITGKTVTTTSFEKIIHGTKVLEIPLEPKNNMKAII
DCAGILKLRNADIELRKGETDVGRKNTRVRLVFRVHIPQPGGQHVSLQVASHPIECSQRS
AHELPMVEKQDMDSCSVLGGQQMILTGQNFSSDSKVIFTEKNQDGQQIWEMEATVDKDKS
QPSMLFVELPSYRETSICHPAKVNFYVINGKRKRSQPQHFTYTPLASPSIKTEPLDEYEA
DHIGFAMPQIFQGMSPHSYYHNPRAVLHPDNGLVSGMASCQRLSSSLPGQDTRFQQQSPA
IVYSRGGKSLSGSPGLYQQTGGMMSDPHRSVLVHTGSPAQSVGPLGAGQHPSIIQFSPNN
HLLRAGDHQPLSAAQPDNQQIIYCDAYSPQSANSPTPPLAQAVVTHPQQYPTVIQQQPFV
QKGQQKGRAPPGTGQMEAPGDGQRRVTVKEENLDQAYLDDVNEIIRKDLTGVQARGQT
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttttacgacgagaaagatttggaggaagagctcagtcgagtcaactgccct
gatgaggatttggagtttgagtacttgtttgaatatgaaccaccttgcagcgactttgct
gggggacatcaagatgaccccaaccttgcatctcataaagtcctcagccctcagtctgag
caggctttccctctggaggaggcctctccatacggcatcaagtcctgtagtccctcctac
agtgagcacaacactgaggttctaccaggatatgacaaccaggaggccagaaactacctg
gacagtacccgtcctgcaggcctggctctgagcccacggatcgaaatcaccccctccctt
ccctacaaccatggccgggactccctgcagaaccaccaactgaacattagccccagaccc
accctcactgttcctggccatgacaaccttgcctaccgtgagccccagtgtctgagtccc
gccagcagcaactcctccaccagctggcactcggagaactactccccctgggcttctcct
tgtgtgtcccccagcagcggccagaaccccggagacctctgcccccgattacagaatatc
cacactggctccccgcgcacctccccgggcacatctcctcgcaccagcctagctgaggac
ggctgcctgggcccccgttcgccctcctccaggcctggctcccgctccacttccccacag
ggcaaacgcacctacgacatgtacaggaatccagcgttagtccctgggcaccgctcccgc
agtccgtccccccacagtggccacgaagatcacaacataggggcccactatcaacacaac
acccttgttgaagccatcaatggttttggcaccaatcagccaggtctggtgccaaccaaa
atagtcaagacgtccaaccaggtttacactctgtatccagagaaccatggagaagggaac
ttcttggtgtcctgtgaacaggacatgaaacccaaacctgctacagagccttactttgtt
atcccccaaatctggcccaagccgctggtgtccagcttctgcagcatcccagtggcttct
ctccccccgctggaatggccgatgcccactcgcacagaacagtatgacctccacattgat
gtgcagcccaagccgcaccacagagctcactatgagacagagggaagcaggggtgctgtc
aaagcgcccacaggaggacaccctgttgtgcagttacatggctacagaggcaaggagccg
ctcggcctgcagatcttcatcggtacagcagacgagcgcatcctcaagccgcacgccttc
tatcaagtccaccgcatcactggcaagacggttacgaccaccagttttgagaagattatt
catggcaccaaagttcttgagatccctctggagccaaagaacaacatgaaagcaataatt
gactgtgctgggatcctgaagctcaggaacgccgacatcgagctgaggaagggcgagaca
gacgttggccgaaaaaacacccgtgttcgtctcgtgtttcgcgtgcacatacctcagcct
ggaggacagcacgtctctctccaagtggcctcgcatcctatcgagtgctctcagcgttca
gcacacgagcttcccatggtggagaagcaggacatggacagctgctccgttctgggaggc
cagcagatgatcctgactgggcagaacttcagctccgattccaaagtcattttcacggag
aaaaaccaggatgggcagcaaatttgggaaatggaagcaacagtggacaaagataagagc
cagccaagtatgctgtttgtggagttgccgtcctaccgagagacgtccatctgtcatcca
gccaaagtgaacttctacgtcatcaacggcaaaaggaagcgcagccagcctcaacatttc
acctatacaccactggcatctccctcaataaagaccgagcctcttgatgagtatgaagca
gaccacattggctttgccatgcctcagatcttccagggcatgtcccctcattcctactac
cataacccccgtgctgtcctccacccagacaacggcctggtctcgggcatggcatcctgt
cagcgtctcagctccagccttccaggccaagacacacgtttccagcagcagagcccggcc
atcgtgtattcccgtgggggcaagagtctgagcggcagccctggcctttatcagcagact
ggagggatgatgtctgacccgcatcggtcagtcctggttcacacaggatccccggcacag
tctgtaggtcctctaggtgcaggccagcacccatctatcatccaattctcccccaacaac
cacctgcttcgggcaggagaccatcaacctctcagtgctgcgcagcctgacaaccagcag
atcatctactgtgatgcctactccccacagtctgccaactcccctacgccccccctggct
caggcggtggtgacccaccctcagcagtatcccaccgtgatccagcagcagcccttcgtg
cagaaggggcagcagaaaggccgggctccccccggcacggggcagatggaggctccagga
gacggacagaggagggtgacggtcaaagaggagaacttggaccaggcctacctagatgat
gtgaatgaaatcataagaaaggatctgacgggcgttcaggcaagaggacagacatag
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