Scomber scombrus (Atlantic mackerel): 133988223
Help
Entry
133988223 CDS
T10651
Symbol
nfascb
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133988223 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133988223 (nfascb)
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
L1 family
133988223 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
BiPBP_C
V-set_CD47
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
133988223
NCBI-ProteinID:
XP_062283779
LinkDB
All DBs
Position
10:23789666..23801428
Genome browser
AA seq
1179 aa
AA seq
DB search
MGALVKPALLLLLWQSVWALDIPLEVRQPPTIIKQSLKEHIVDPKDTMVIECEAKGNPHP
IFSWRRNGKYFNVARDSQVSMRRRSGTLDISAWNNPEQYEAEYQCIASNQYGSAYSNKIR
LQLYRAPVWPREIIEPVVVSAGLPLVLSCDPPPGPPKPETYWMSSCSYARPFNWPIQTAF
PTMQPVRQDRRVSMGENGDLYFSNVLVNDSAADYCCNARFPYKNVIQQKMPVVVKVLTTR
TIAEAAPTWLSPKGSSSSKLVLQGEELLLECIAAGMPTPRITWTKNGENLVVTSRMKVKH
FNKMIQIPKASFEDAGEYVCTAANKINYIEHTITIRVKAAPFWLEKPTDLVLAPEENGRL
VCRSDGAPRPTISWFINGEPIETATPQPNRQVSGDTLNLRSVTALDTAIYQCNASNQYGY
LFANALVNVLHATPRILSARNELMKVTEGSRTFLDCRYFGSPVPELRWSKLGQGNIEGNR
FKTHSNGTLEMRRILMDDQGTYLCVVNNIAGRDEIQVRIEVKEPTVIVTKPQNMKVIRGS
DVRFECGVKADITTPVTTTWMKDKKTVNIGWRMSLDESNLVITNVNRGDEGNYTCLIKSE
LDQKSASARLMVMDRPDPPTNLELSDPYERTVRLSWVPGDSNHSPIKEYLVQYDDDDWLP
GKWKNLSTYPGSLNSVILHLIPFTYYEFRVIAISEIGMSRPSRHSMRFQSSGAPPDVVPK
NLKGVGTWRNNMEISWEPLMYREWNGPHLKYLVWWRRRDSREEWKNATTKWLKYYIYDAD
TFTPYDLKVQAVNDFGLGPESPVVTGYSGEDRPLTAPLNPRVSDIESTQVTVHWDPVTRN
TIMGELKEYKVYYWRDSSQLRWLRVNRAMKSIAFPNNDPDPSGVITGLFPYSNYKMYIVV
ANNRYEGPPTNNIFFSTTEGVPSVPRSFRIQQRHLDSIYVDWDVPAEPNGVITGYSLKYQ
TVNTTRGEELQSEEFPPNVTSFSVRRYDRYTRYRFSVAARTMIGIGEWHTEESPHYTTEI
YAQDQVDISTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVREKKDISLEPVDDKDQ
EGSFDYRSLERIARVSTLPYPRREEERGLQRGQLSMEAMIKHSDSDDSLVDYGEGGEIPF
NEDGSFIGQYTGNRRDVRELDFGGSLELHSPMNTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcactggtcaaaccagcgctgctgctacttttatggcagagtgtttgggctttg
gacatccctctggaagtcagacaacccccaaccatcataaagcagtcactaaaggaacat
attgttgacccaaaagacactatggtcatagaatgtgaagcaaaaggaaacccacatccc
attttctcatggaggcgcaatgggaagtatttcaacgtggcacgtgactcgcaggtatcg
atgcgcaggcgctcagggacgctggacatctctgcctggaacaatccagaacagtatgag
gcagaatatcagtgcattgcctccaaccagtacggatctgcatactccaacaagatcaga
ctacaactgtacagagctcctgtgtggccgagggagattatagagcctgtggtggtcagc
gctggtttgcctctggtgctgtcctgtgaccctccgcctgggccgcctaaacctgaaacc
tactggatgtcaagctgctcatatgcgaggccttttaactggccaattcagacagctttc
cccaccatgcagcctgtgcggcaggaccgcagggtatccatgggagaaaacggagatctg
tacttctctaacgtcctggtcaacgactctgctgctgattactgctgcaatgcccgcttc
ccatataagaacgtcatccagcagaagatgcctgtggttgttaaggtgctcacaactcgt
acaatagctgaggctgcccccacctggctgtctcccaaaggctcatccagctccaaactg
gtcctgcaaggggaggagctgctcctggagtgcatcgctgcaggaatgccaactccccgt
attacctggaccaagaatggggagaacctggtggtgacgtcacgcatgaaagtaaaacac
ttcaacaagatgattcaaatcccaaaggcgtcttttgaagatgcgggtgaatacgtctgc
actgctgccaataagatcaactacatcgagcacactataaccatcagggtcaaagcggct
ccattctggttagagaagcccactgatttggttttggcccctgaagaaaatggacgtttg
gtatgtcgttctgatggagctcctcgtcccacaattagctggttcatcaatggagaacca
atcgaaactgctacaccacagcctaaccgacaggtgtcaggagacacgctgaacctccgc
agtgttactgctctagacaccgctatctaccagtgcaatgcttcaaatcagtatggctac
ttatttgccaatgcattggtcaatgtactacatgcaactccacgtattctctcagccaga
aatgaactgatgaaggtgacagagggcagccgcaccttcttagactgccgctactttggt
tcaccagtgcctgagctgcgatggtccaaattaggacaggggaacattgaaggaaatcgt
tttaagacccatagtaacggaactctggagatgagacgcatactgatggacgaccaggga
acttacctgtgtgtagtcaacaacattgcaggaagagatgagattcaagtccgaatagag
gtcaaagaacccactgtgatcgtcacaaaaccacagaacatgaaagtcatacgtggaagt
gatgttcgcttcgagtgcggcgtgaaagcagacatcactactcctgtcacaaccacttgg
atgaaagataaaaagacagttaatattggctggagaatgtctttggatgaatcaaatctg
gtcatcactaacgtaaacagaggtgatgagggaaattatacatgtctcattaagagtgag
cttgaccagaagtctgcctcagcacgcctaatggtgatggaccgtcctgatcctcccaca
aacttggagttgtcggatccatatgaacgtactgtaagactcagttgggttcctggagac
agcaaccacagccctataaaagagtacttggtgcagtatgatgatgatgactggctgcct
ggcaagtggaaaaacctgtcaacatatccaggaagcctcaactctgtcattctgcatctt
atacctttcacctactacgaatttcgggtcatcgcaatcagtgaaatcggaatgagtcgc
ccaagtcgtcattcaatgcgtttccagagcagcggtgcacccccagatgtcgttccaaag
aacttaaaaggagtgggtacatggagaaataacatggagatcagttgggagcctctgatg
tacagagagtggaatgggccccacctgaagtatctagtatggtggcgacggagagattcc
cgagaggagtggaagaacgccaccactaaatggctaaaatactacatctacgatgcagat
acctttactccttatgatctaaaggtccaggctgtcaatgattttgggctgggcccagag
tctcctgttgtaaccggttactctggggaagaccgtcccttaactgcacccctgaacccg
agagtgtccgacatcgagagcacccaggtgaccgtgcactgggacccagtgacacgcaac
actattatgggagaactgaaagaatacaaggtgtactactggagggacagcagtcagctg
aggtggctgagggtcaacagagctatgaagtctatagcatttccaaataatgacccggat
ccatctggggtcatcactgggctctttccctatagcaactacaagatgtatatagtagtg
gcaaataatcgatatgaagggccgcccactaataatatattcttctcaacaactgaagga
gtaccatctgttcccagatccttcaggatccaacagcgacatctggacagcatttacgtt
gactgggacgtgccagcagagcccaacggagtcatcaccggatattccctcaagtaccaa
acagtaaataccaccaggggagaggagctgcagtctgaggagttccctccaaacgtaaca
agtttctcagtccggcgatatgaccgctacactcgatacagattctctgtggcggcacga
actatgatcgggataggggaatggcatacagaggagtcaccccactacaccactgaaatc
tatgctcaggaccaggtggacatctccactcagggctggttcatagggataatgtgcgct
gtggctcttatcgtgctcatcctacttatagtttgcttcatcaagaggagccgagggggg
aaatacccagtacgggaaaaaaaggacatttcattagagccagtggatgacaaagatcag
gagggatcattcgactatcggtctcttgaaaggatagcgcgtgtgtccactctgccctac
ccccgacgggaggaggaaagagggctgcaaagaggtcagctatcaatggaggcaatgatt
aagcattcagacagtgacgacagtctggtagactacggagaaggaggagagataccgttc
aatgaggacggctcgttcattggccagtacacaggaaacaggagagacgtcagggagttg
gactttggtggaagtcttgagctccactctccaatgaataccatctactccctggcataa
DBGET
integrated database retrieval system
