Scomber scombrus (Atlantic mackerel): 133988252
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Entry
133988252 CDS
T10651
Symbol
ppardb
Name
(RefSeq) peroxisome proliferator-activated receptor delta b
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03320
PPAR signaling pathway
ssco04148
Efferocytosis
ssco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133988252 (ppardb)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133988252 (ppardb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
133988252 (ppardb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133988252 (ppardb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
133988252 (ppardb)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133988252 (ppardb)
Nuclear receptors [BR:
ssco03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
133988252 (ppardb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
WHD_LYAR
Motif
Other DBs
NCBI-GeneID:
133988252
NCBI-ProteinID:
XP_062283815
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Position
10:complement(14879250..14886700)
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AA seq
507 aa
AA seq
DB search
MEGFQKSAEEQHNRVNGYCEPKSPQDTADVRWTTPERESGGSDSCGGRSVTDVQDLKARE
SENEEDKEDKEVVPASKGLKGDQKKREKESQDPEENDHSRQNSSAASSYTDLSQTSSPSL
SEQLRLGREESTGAGISVECKVCGDKASGFHYGVHACEGCKGFFRRTVRMKLEYERCERS
CKIQKKNRNKCQYCRFQKCLSLGMSHDAIRYGRMPEAERKKLVAGLLAEELNHSKPGGSD
LKTLAKQVNAAYQKNLSMTKKRARSILTGKTSSTSPFVIYDVDTLWKAESGLVWSQLLPG
APLTKEIGVHVFYRCQCTTVETVRELTEFAKCIPGFVDLFLNDQVTLLKYGVHEAIFAML
PSLMNKDGLLVANGKGFVTREFLRSLRKPFSEIMEPKFEFAVKFNALELDDSDLALFVAA
IILCGDRPGLMNVKQVEQSQDNILQALDLHLQANHSDSVYLFPKLLQKMADLRQLVTENA
QLVQKIKKTESETSLHPLLQEIYKDMY
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtttcagaaatctgctgaagagcagcacaacagggtaaatggctactgcgag
cccaagtccccacaggacacagctgatgttaggtggacgacgccagagagagagtccgga
ggttcagacagctgcggggggagaagtgtgacagatgtgcaagacttgaaagccagagaa
agcgagaatgaggaggacaaggaggacaaggaggtagtgcctgcttctaaaggcctgaaa
ggggaccagaagaaaagagagaaggagagtcaggatccagaggagaacgatcacagcaga
cagaacagcagtgcagcctccagctacacagacctgtcccaaacctcgtctccttcgctg
tcggagcagctgcgtcttggccgagaagaaagcacaggggctgggatcagtgtggagtgt
aaggtctgtggggacaaggcctcaggcttccactatggcgtgcatgcgtgcgagggttgc
aagggctttttccggcgaactgtgcggatgaaactggaatatgagcgctgtgagcgttcc
tgcaagattcagaagaagaatcgtaacaagtgccaatattgtcgcttccagaagtgcctg
tctttgggaatgtcccatgatgctatccgatatggacgtatgcctgaggcagagcggaag
aagctggtggcaggcctgctcgcagaagaactgaaccacagcaaaccgggtggctcagac
ctgaagaccttggccaaacaagtcaacgcagcctaccagaaaaacctcagtatgaccaag
aagagggcccgcagcatcctaacgggcaaaaccagcagcacctcgccctttgtgatctac
gatgtagacacactctggaaggcagaaagtggtttggtatggagccagttacttccaggt
gcacccctgaccaaggagattggggtccatgtgttctaccgctgccagtgcactacggtg
gagactgtgcgagagctcactgagttcgccaagtgcattccagggtttgtggacctcttc
cttaatgaccaggtgactttgctgaagtatggtgtgcatgaggctatttttgcaatgctg
ccctctctcatgaacaaagatggacttttggtagccaatggtaaaggcttcgttacgagg
gagttcctgcgcagcttaagaaagcctttcagtgagatcatggagcccaagtttgagttt
gccgtcaagttcaatgctctggagctggatgacagtgacctggccctgtttgttgctgcc
attattctctgcggtgatcgtcctgggctaatgaacgtgaagcaggtggagcagagtcag
gacaacatccttcaggctctggacctccacctccaagcaaatcactctgactctgtctac
ctcttccccaagctgctgcagaagatggctgacctccgtcagctggttactgagaacgct
cagcttgtccaaaagatcaaaaagactgagtcggagacctcgctccaccctctactacag
gagatctacaaagacatgtattag
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