Scomber scombrus (Atlantic mackerel): 133988253
Help
Entry
133988253 CDS
T10651
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133988253 (mkrn4)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133988253 (mkrn4)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133988253 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Torus
zf-CCCH
zf-RING_2
zf-CCCH_4
zf-C3HC4
zf_CCCH_4
zf-rbx1
zf-UDP
zf-RING_UBOX
zf-RING_5
zf-CCCH_3
zf-CCCH_2
IBR_1
zf-C3HC4_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
133988253
NCBI-ProteinID:
XP_062283816
LinkDB
All DBs
Position
10:complement(14875402..14879495)
Genome browser
AA seq
391 aa
AA seq
DB search
MEGDWRHAQNTWRMGSEMERFSTGRSGGICRRFINGSCRLGPRCNYRHEWPVRSSSQICR
YFQKGLCWYGDYCKYVHVLQPEGDAAIAGRRASVPTVSTSSVATALPDRRGSEPALLQTE
VMSRWEHSMSHSHSVVNVSNPQYNTGRLAADIAEEQSQDNNTYLTASWESVQISGGAQAG
AYDGRNEQETSSNQTDDVGAAAASTTQGIVGEIEAFLQSKNMTCGICMDKVYEKPDPRHQ
VFGILPNCSHSFCLHCIRTWRKTKDLGPDVVKSCPQCRVRSAFYVPNKYWVEGQAKENII
ATFKEKFSKKSCSYYTRYRCCPFKTECLYRHDKTARRRSFPYHTEDEDDYDGVDLLNFFI
AMTLLGGDDDDDDDNDDDFDFPFYLTEEYGF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagggagactggcggcatgctcaaaacacatggaggatgggctcggagatggagcga
ttctcaactggccgtagtggaggtatttgtaggcgtttcatcaatggctcttgcagattg
ggtccaaggtgtaattatcgacatgaatggcctgtaagatcatcatcccaaatatgtaga
tattttcagaaaggcttatgctggtatggtgattactgcaagtatgtccatgtccttcag
ccagaaggtgatgcagctattgcaggtaggagagcttcagtacctacagtttccacttcc
agcgtggccacggctctgccagatagaagagggtcagagcctgctcttctgcagaccgag
gtgatgtccagatgggagcacagcatgtcacacagtcactctgttgttaatgtctcaaat
cctcaatacaacactgggcgcctggcagcagatattgcggaagaacaatcacaagacaat
aacacttatctaaccgcttcttgggagtcggtccagatctcaggaggggctcaagcaggt
gcatatgatggaagaaatgagcaggagacctcttccaatcagacagatgatgttggtgcg
gctgcagcctctactactcaggggatagtaggtgaaattgaggccttcctccagagtaaa
aatatgacctgcggcatatgcatggacaaggtgtatgaaaaaccagatccaagacaccag
gtatttggtatcttgccgaactgcagtcactccttctgtttacactgcatcaggacctgg
aggaaaacgaaagacctcgggccggatgtcgtaaagagctgcccacagtgccgagtgagg
tctgccttttatgtgcccaacaagtactgggttgaaggacaagcaaaggaaaacataatt
gctaccttcaaagagaaattcagtaagaaaagctgcagttactatacacgatatagatgc
tgtcccttcaaaacggagtgcctttaccgccatgataagactgcacgtcgcaggtcattt
ccttatcatactgaagatgaagatgactacgatggtgtagatctgctaaattttttcata
gccatgacccttcttggcggtgatgatgatgacgacgacgacaatgatgatgactttgac
tttcctttttacctcactgaggagtacggtttctga
DBGET
integrated database retrieval system
