Scomber scombrus (Atlantic mackerel): 133988277
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Entry
133988277 CDS
T10651
Symbol
tbc1d25
Name
(RefSeq) TBC1 domain family member 25
KO
K24799
TBC1 domain family member 25
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133988277 (tbc1d25)
Membrane trafficking [BR:
ssco04131
]
Others
Specific organelles associated proteins
Auto phagosome
133988277 (tbc1d25)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
133988277
NCBI-ProteinID:
XP_062283856
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Position
10:complement(1739964..1751700)
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AA seq
860 aa
AA seq
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MAGEEERGVVRVKVKKCDGVLPVEFRSFAVDPQITSLEVLQHILIRAFDLNGRRTFGISY
LSRDRSGAEIYLGLLSDWDLDVAFVSAAKPYLQLKMDIKPSEDSPVMEDWDIISPKDVIG
SEQLLSDKTRSLASAALPLTQSFLSQVGRTLSKVQQVFSWSYGEEIKPFKPPLTDAEFHS
YLNGQGQLTRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLSGQERMDYMKRKTREYD
QLKSEWTARASQEDLEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLTTFAITHP
QISYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDGQLMSIKFQHLKLLLQY
SDPEFYSYLVSRGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPETEVELL
GPPLESDETMAQCTDKDKTAENCQADDQEQKEKRRRHMLRPSREEPDASRIAVTEEKKRQ
NFSAGKESEGADCDIPQVTTEKADLQAPPFERQTSFGEFKYYTARNEDSFDMEQQQGVWS
SKSSIPTRQSTMDSEDDPEERTPLIKNCENGFSPMSSPSLLPNGLPTWNTGSSTSSASPS
SWPGASPDSPPKSPPKSTTNGREALPRTVQEVLSSSAQVLSSTRIISPMTPTVKTSVASP
SPTQNRSLLSSPILSFGRGPSLPGSRASSNNLSSPGNKSPNTTANTPSSTKAETTSIKPC
SLPPPQEFGKGNPFMLFLCLSILLEHRDHIIKNSLDYNELAMHFDRLVRRHNLSRVLQRA
KALFADYLQSEVWDSEEGDEVSSDSPTTASAALHSPSSTISARPIYSPLALPQASSPNST
YNLATTISSPTAEVSLSPTS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgaggaggagaggggggtggttcgagtcaaagtaaagaaatgtgacggggtg
cttcctgtggagttccgttcctttgctgttgatcctcagataacatcgctggaggtcttg
cagcacatcctcattagagccttcgatttgaacgggaggcggacttttgggatcagttac
ctgtctcgggatcggagtggtgctgaaatatatttgggtctgttgtctgactgggattta
gatgttgcatttgtcagtgcagccaagccgtatctacagctgaagatggacataaagccg
tcagaagacagtcctgtaatggaggactgggacatcatcagccccaaagatgtgattggc
tctgagcagcttctgtcagacaagacgaggtctttggcctctgcagctcttcccttgacc
cagtcttttctgtcccaggtgggccgcaccctgtccaaagttcaacaggtcttcagctgg
tcttacggggaggagatcaagcctttcaagccccccctgaccgacgctgagtttcacagt
tatctcaatggacagggtcagctgacacgacctgaggagctgagactgaggatctaccat
ggtggtgtagagccttcactgcgcaaggttgtttggcggtatctccttaatgtctaccct
gatggactgagtggacaggaaagaatggactacatgaagcgcaagacgagggagtatgac
cagctgaagagtgagtggacggcccgtgccagccaggaagaccttgaattcatccgaggg
aacgttctcaaagatgtcctgaggacggaccgggcccacccatactacgccggctcagag
gacagtccacatctgactgccctcacagatctgctcaccaccttcgccatcacacatcca
cagatatcatactgtcaaggcatgagtgacattgcctcccctatactcgcagtcatggac
aatgaagcgcacgccttcatttgcttttgtggcatcatgaaacgcttggagggaaacttc
cggccagacgggcagctcatgtctattaagttccagcatctaaagctgctcctgcagtac
tcagatcctgaattttactcctatctggtctcccgaggagctgatgacctcttcttctgt
taccgctggctgcttctggagctcaagcgagagtttgcgttcgatgacgctctgaggatg
ctggaggtgacttggagctccttgcctccagatcctcctgaaaccgaagtggaacttctg
ggaccaccgctagagtcggatgaaacaatggcacaatgcacagacaaggacaagacagct
gagaactgccaagcagacgatcaggaacaaaaagagaagcggaggcgacacatgctgaga
ccttcaagagaagaaccagatgccagcaggatcgctgtcacagaagagaaaaagaggcag
aacttcagcgctggaaaggaaagcgaaggcgctgattgtgatatccctcaagtgaccaca
gaaaaagctgatttgcaggctcctccttttgagagacaaactagttttggagagtttaaa
tactataccgcccgaaatgaagatagctttgacatggagcaacaacagggtgtgtggtct
tccaaatcaagcatcccgacgcgccagtccacaatggacagtgaggacgacccagaagaa
agaacacctctcataaaaaactgtgaaaatggtttctctccaatgtcatcaccttccctg
ttacccaatggcctcccaacgtggaacactggctcctctacatcttcagcttcaccttcc
agctggccaggtgcttctccagactctcctccaaaatctcctccaaaatcaacaaccaat
ggaagagaggccttaccgagaactgtccaagaagtcctgtcctcctctgcccaagtgctc
agcagtaccaggatcatctcgcccatgacccccactgtaaaaacatctgtcgcgtctccc
tcccccactcagaaccgatccctactctcctcacccattttgtctttcggaagaggcccc
tcgctgccgggcagcagggcgtcctccaacaacctctcttcacctggcaacaaatcccca
aacaccacagctaacacgcccagttccacaaaagccgagaccaccagcatcaaaccgtgc
tccctgccacctcctcaagagttcggcaaaggcaacccctttatgctgttcctgtgcctg
tccatcctgcttgagcaccgagaccacatcatcaagaacagcctggattacaatgagtta
gccatgcactttgatcgccttgtgcggcgccacaacctgagcagggtgctacaacgagcc
aaggccttatttgcagactacttgcaaagtgaagtatgggactcagaggaaggggacgag
gttagctcggactccccaacgacagcctcggctgccctacactccccttcttcaaccatc
tctgcccggcccatttacagccctttagcgttgcctcaggcatcatctccgaactcaacc
tataacctcgcaaccaccatctcctccccgacagctgaagtttccctttctcctacgtcc
tga
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