KEGG   Scomber scombrus (Atlantic mackerel): 133988296
Entry
133988296         CDS       T10651                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco00310  Lysine degradation
ssco01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    133988296 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    133988296 (plod1a)
Enzymes [BR:ssco01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     133988296 (plod1a)
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   133988296 (plod1a)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 CKI PAP_RNA-bind
Other DBs
NCBI-GeneID: 133988296
NCBI-ProteinID: XP_062283887
LinkDB
Position
10:582849..617670
AA seq 774 aa
MKVSLVLLFSGFLVCALFPPTNCAEQRVPEDKLLVVTVATKQTDGFRRFLRSAKHFNYTV
KVLGQGEKWTGGDYMSAPGGGQKVRLLKEAVEKMKDEDKIILFIDSFDLVFASGPKELLK
KFQQARHKVVFSSESLIWPDRHLEDKHPHVREGSRFLGSGAFIGYLPNIKEMVADWTGED
KDSDQLFFTKIYINPEKRKSINITLDNKCRMFQNLHGALDEVLLKFEDGRVRVRNVLYDT
LPVIVHGNGPTKLQINYLGNYIPNAWTFESGCTVCHEDLYSLTALKESEYPLVMIGIFIQ
QPTPFVTVFFERLLKLQYPKKKLKLFIYNQEAHHERQVSSFLQEHGSLYQDVKLIGPEEE
MDEAAVRNLGFDMCRKDKDCDYFFSLDIEVVLKNENTLKILIEQNLPVLAPMITRTGRLW
SNFWGALSAEGYYARSEDYVDIVQGRRLGVWNVPYVSSVYLMKAGLLRSELTDYELFNSH
ILDPDMAYCHNIRNKGIFMYVTNMHTFGRILSTEKYETSYLHNDLWQIFENPMDWQERYI
HENYTHMIKDKLIETPCPDVYWFPVFNDVACDHIVEEMEHFGKWSGGGNADTRIQGGYEN
VPTIDIHMNQINYEKNWQQFLVEYIAPITEKMFPGYYTKCSTPLNFVVRYKPDEQPLLAP
HHDASTFTINIALNRKGVDYQAHFDLAFVVRYKPDEQPSLKPHHDASTFTINLALNQVGL
DYQGGGCRFLRYNCSIDAPRKGWALMHPGRLTHYHEGLPTTAGVRYIAVSFVDP
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgaaagtttcgctggtgctgttgttttcagggtttttggtctgtgcacttttccctccg
acgaactgtgcagagcagcgcgtccccgaggacaaactccttgttgtgacagttgcaacc
aaacaaactgatggcttcaggcgttttctgaggtcagctaaacacttcaactacactgtg
aaggtccttggtcagggtgagaaatggacaggaggcgactacatgtcagcaccaggagga
ggccagaaagtgcgactccttaaagaagctgtggagaagatgaaggatgaagacaaaata
atcctttttattgacagctttgatttggtgtttgcctcgggtcccaaagaactgctcaag
aagttccagcaggctagacacaaggtggtgttttcctctgagagcctgatctggcccgac
agacacctggaggacaaacaccctcacgtcagggagggcagcaggttcctgggctctggg
gctttcattggctaccttcccaacatcaaagaaatggttgctgactggacaggagaagac
aaagacagtgaccagctgttcttcaccaagatttatatcaatccagaaaaaagaaaatcc
ataaatatcacattggacaacaaatgcagaatgttccagaaccttcatggagcacttgat
gaggtgttgttgaagtttgaggatggacgggtacgagtcagaaatgtgttgtatgatact
ctgcctgtcatcgtccatgggaacggaccaaccaagctccagatcaactacctgggcaac
tacatccccaatgcatggacatttgagagtggatgcacggtgtgtcatgaggatctatac
tcactcacagctcttaaggaaagtgagtacccgctggtaatgattggcatcttcattcag
cagcccaccccttttgtcacagtgttttttgaacgcctgctgaagctccagtatcccaag
aagaagctcaaactcttcatttacaaccaggaagctcatcatgagcgtcaggtcagctct
ttcctgcaggagcatggaagtctttatcaggatgtgaagttgatcggacctgaagaggag
atggatgaagctgcggtccgcaacctgggctttgatatgtgtcggaaggacaaggactgt
gactatttcttcagcttggacatagaagtggtcttaaaaaatgagaacacactcaaaatt
ctcattgaacaaaaccttcctgttctggcaccaatgataactcggactggcagactgtgg
agcaacttttggggagccctcagtgcagaaggctactatgctaggtctgaagactatgtg
gacattgttcaaggacgcaggctgggtgtgtggaatgtcccatatgtgtccagtgtgtac
ctgatgaaggccggcctccttcgatcagagctcacagactacgaattgtttaactcacat
attctagaccctgacatggcttactgccacaacattcgcaacaagggaatcttcatgtat
gtaaccaacatgcacactttcggtcgcatcctatcaacagaaaagtatgagaccagttat
cttcataatgatctgtggcagatctttgaaaacccaatggactggcaggagcgctacatt
catgagaactacactcacatgattaaggataaactgattgaaactccttgtcctgatgtg
tactggttcccagtgttcaatgatgttgcttgtgaccacattgttgaagaaatggaacat
tttgggaagtggtcaggaggaggcaatgcggacactagaatccaaggtggctatgagaac
gtccctaccattgatatccacatgaatcaaatcaactatgaaaagaactggcaacaattt
ttagtggagtacatagcaccgataacagagaaaatgtttcctggttactacaccaagtgt
tctactcccttgaacttcgtggtgaggtacaagcctgacgagcagcccctgctcgcgcct
caccatgatgcctccacattcactattaacatagctctcaacaggaaaggtgtcgactac
caggctcattttgacttggcctttgtagttagatataaaccagatgagcagccatctttg
aagccacaccatgacgcctccacattcactataaaccttgcactcaatcaagtgggcctt
gattaccagggtggtggatgcagattcctccgctacaactgctccattgatgctccccgt
aaaggctgggccctcatgcacccgggccgcctcacccactaccacgaaggcctgccgacc
acggccggtgtccgctacattgcagtatcgtttgtggatccctga

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