Scomber scombrus (Atlantic mackerel): 133988320
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Entry
133988320 CDS
T10651
Symbol
ctnna2
Name
(RefSeq) catenin alpha-2
KO
K05691
catenin alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04520
Adherens junction
ssco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133988320 (ctnna2)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133988320 (ctnna2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133988320 (ctnna2)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133988320 (ctnna2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
PipB2_N
Motif
Other DBs
NCBI-GeneID:
133988320
NCBI-ProteinID:
XP_062283929
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Position
2:20112267..20450799
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AA seq
905 aa
AA seq
DB search
MTTATSPILLKWDPKSLEIRTLTVERLLEPLVTQVTTLVNTSNKGPSSKKKGRSKKAHVL
AVSVEQATQNFLEKGEQIAKDSQDLKEELIAAVEDVRKQGDTMRIASSEFADDPCSSVKR
GTMVRAARALLSAVTRLLILADMADVMRLLAHLKIVEEALEGVKNATNEQDLANRFKEFG
KEMVKLNYVAARRQQELKDPQCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRANR
DYVFKQVQEAIGGISSAAQATSPTDEKHGHAGIGELAAALNEFDNKIILDPLTFSEARFR
PSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRKEKGD
PLNSAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEKEVKEYAQV
FREHANKLVEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQD
NMDVFKDQWEKQVRILTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRTA
GAIRGRAARVVHIINAEMENYEPGVYTERVLESIKLLSETVMPRFAEQVEVAIEALSTNP
PQAFEENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQEDYDTRSRTSVQTEDD
QLIAGQSARAIMAQLPQEEKAKIAEQVESFRQEKCKLDAEVAKWDDNGNDIIVLAKQMCM
IMMEMTDFTRGKGPLKNSSDVINAAKKIAEAGSRMDHLARAVADQCPDSACKKDLLAYLQ
RIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLMNAVVLTVKASYVAST
KYQKVYGTAAINSPVVSWRMKAPEKKPLVKREKPEECQTRVRRGSQKKHISPVQALSEFK
AMDSF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgccacctcccccatcttgttgaaatgggaccccaagagtcttgaaatccgc
accctgactgtggagaggcttcttgagcccctggtcacacaggtgactaccctggtaaat
accagcaacaaagggccatccagtaagaagaaggggcgctccaagaaggcccatgtcctc
gcagtgtctgttgagcaggctactcagaactttctggagaagggtgagcagattgccaaa
gacagccaggatctcaaggaagagctcattgctgctgtggaggatgtccgtaagcaagga
gacacgatgcgtattgcctcctcagagtttgctgatgacccgtgctcctccgtgaaacgt
gggaccatggtgagggccgcccgcgccctgctctctgctgtcacccgcctgctcatcctt
gctgacatggctgatgtcatgaggctgctggcccaccttaaaattgtggaggaggccctg
gagggagtaaagaatgcgaccaatgaacaggacctggccaaccgcttcaaggagtttggg
aaggagatggtgaagctgaattatgtggcagcccggagacagcaggaactgaaagaccct
cagtgtcgagatgaaatggcggctgcacgcggggctctgaagaaaaatgccaccatgctg
tacactgcctcacaggccttcctgcgtcacccagatgtggcggcgacacgtgctaaccga
gactacgtgttcaagcaggtgcaggaggccatcggtggcatttccagcgctgctcaggcc
acctcgcccactgatgagaagcatggtcatgctggcattggagaactggctgctgccctc
aatgaatttgataacaagatcatcctggaccctttgacattcagtgaggcacgtttccgg
ccctctctggaggagcgcttggaaagcatcatcagtggcgctgcactaatggctgactct
tcgtgcacacgtgacgaccgccgagaacgcattgtggctgagtgcaatgctgttcgtcag
gccctccaagacttgttgagcgagtacatgaacaatactggcaggaaagagaaaggtgac
ccactgaactcagctattgataagatgaccaaaaagaccagggacttgcgtcgacagttg
agaaaggcagtgatggaccacatctcagactctttcctggagaccaacgtccctctgttg
gtgcttattgaagcggctaagagtggaaacgagaaggaggtcaaggagtatgcccaggtg
ttccgtgaacatgccaacaagctggtggaggtggctaacctggcttgctccatctccaac
aatgaagagggtgtgaagttggttcgaatggctgccacccaaattgacagcctatgtcca
caggttatcaatgctgcactcactctggctgcccgccctcaaagcaaagtggcccaggac
aacatggatgtcttcaaggaccagtgggagaagcaagtgcgcatcctgaccgaggccgtg
gatgacatcacctctgtggatgacttcctttctgtgtcagagaaccacatccttgaggac
gtcaacaaatgtgtaattgctctgcaagagggggatgtggacactcttgaccgaaccgct
ggagccatccggggccgagccgctcgcgtggtccacatcattaatgctgagatggagaac
tacgaacctggggtctacactgagcgtgtgctggagtccatcaagctcctgtctgagact
gtcatgccccgttttgctgaacaagtggaggtcgctatcgaggcactgagtacaaacccc
ccacaggcctttgaggagaacgagttcattgatgcgtcccgtttggtctacgatggtgtc
cgtgacatcaggaaagctgtcctcatgataaggacaccagaggagctggaggatgactct
gactttgaacaggaggactatgatactcgcagcaggaccagtgtccagactgaagatgac
cagcttattgctggacagagtgctcgggccatcatggcacagcttccccaggaggagaag
gccaagattgctgagcaggtggagagcttcagacaggagaagtgcaagctagatgcagaa
gtggccaagtgggatgacaacggcaatgacatcattgtgctggccaagcagatgtgtatg
atcatgatggagatgacagacttcaccagaggcaaaggccccctgaagaactcgtcagat
gtgattaacgcagctaagaagattgcagaggctggttccaggatggaccatctggcccgt
gctgtcgcagatcagtgccctgattcagcgtgcaagaaggatcttctggcctatctgcag
agaattgccctgtattgtcatcagctcaacatctgcagcaaggtgaaagctgaggttcag
aatctgggtggagagctcatcgtgtctgggctggatagtgccacctccctaatccaagca
gccaaaaacctaatgaacgcagtggtgctgactgtaaaggcatcttatgtagcctctacc
aaataccagaaggtgtatggaacagcagccatcaactcacccgtggtgtcttggcgtatg
aaggcccctgagaagaaacctctggtaaaaagggagaagcccgaggagtgccagacacgt
gtgcgacgaggctcccagaagaaacacatctcccctgtccaggccctcagcgaattcaag
gccatggactcattctaa
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