Scomber scombrus (Atlantic mackerel): 133988327
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Entry
133988327 CDS
T10651
Name
(RefSeq) actin nucleation-promoting factor WAS-like isoform X1
KO
K05747
Wiskott-Aldrich syndrome protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04520
Adherens junction
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133988327
04530 Tight junction
133988327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133988327
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133988327
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133988327
Membrane trafficking [BR:
ssco04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
133988327
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
133988327
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
EVH1 / WASP homology (WH) domain-containing proteins
WH1 domain-containing proteins
133988327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
PBD
WH2
CAF1
Motif
Other DBs
NCBI-GeneID:
133988327
NCBI-ProteinID:
XP_062283936
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All DBs
Position
10:24362222..24366451
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AA seq
540 aa
AA seq
DB search
MSRGSKNKSEGFQSSLLTSQENDKLEDLLGRRCASMATAVAQLYMALPHSSNVWSLQHTG
VVCLVKDNPMRSYFIRMFDVKAGRQIWEQELYNQFVYDSPQVYFHTFSADDCQVGLNFAE
QQEAQAFQNAVEEKINQRHRSQDKKQRPPQHAARGSLPSVPPDKTSGSPGSFQMATVDIQ
NPDIQTSRYRSMPTPAHASLPVGGKGKKDKKSKKKGPKFSKADIGAPSGFKHVSHFGADP
NNMDPDLMKLLSQAGIQEADLRDEATSQLIYNVIEQSGGMEAVKREVNKAASGAPPPPPG
RQGPLPPVPGPSHSAPTPPPPRGRSGPLPPVPAQSQRGALPSQPPPSRGGLPPPPATGRG
GPPPPPPAHSSHSPSPPSSKPTQSFHTMPPPPPPSHQERSMGFQPPPVPAASRGGGGGGA
PPPPPPPPPPPPQTSISSDFPPPPPLSGGPPPPPPASGGGRGGGGGGGGESRGALLDQIR
LGKKLKNVIEDSPPPTSDSGEGIVGALMMVMQKRSKVIHSSDESEDDAGDEDDDDDEWDD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtggaagtaaaaataaatcggagggtttccaaagcagtctgctgacctcacag
gagaatgacaaactggaggacctgctgggcagaaggtgtgcttccatggccaccgcagtt
gcacagttgtacatggctctgcctcacagttcaaatgtttggagcctgcagcacacagga
gtggtctgcttagtaaaagacaaccccatgcggtcctacttcatacggatgtttgatgtg
aaggcagggaggcagatttgggagcaggagctatacaaccaatttgtttacgactcacca
caagtgtactttcacaccttttctgcagacgactgtcaagttggactgaattttgcagag
caacaggaagcacaagccttccaaaatgctgtcgaggagaaaataaaccaaagacacaga
agtcaagataagaaacagcgccccccgcagcacgctgctagaggatccctgccctcggtc
ccacctgacaaaacatctggcagtcctggttcttttcaaatggccactgtggacattcag
aacccagatattcagacttcacgctatcgttcgatgcctacacctgctcatgcttcctta
cctgtgggtggcaaagggaagaaagacaagaagagcaagaaaaagggccccaaattctcc
aaggcagacataggagcacccagcggatttaagcatgtttctcattttggcgctgatccc
aacaacatggatcctgacctgatgaagctgctttcccaagctgggatccaagaagccgat
ctcagggatgaagcgacctcccagctcatctacaatgtcatcgagcagtctgggggcatg
gaggcagtcaaaagggaggtgaacaaagcagcttctggagctccaccccctccacctggc
agacaagggcctctgcctcccgtaccaggccccagtcactctgctccaacacctccacct
ccacgaggtcgttctggccccctgcctcctgtcccagcccagtcacagcgaggagccctg
ccctcccagccacctccatcacgtggaggcctgccacctccacctgcaacaggcagaggc
ggtccaccacctccaccaccagcacactcttctcactccccttcaccaccatcctcaaag
cccactcagtccttccacaccatgcctcctcccccaccgccttctcatcaagagcgctct
atgggtttccaacctcctcctgtcccagcagccagcaggggaggtggaggaggaggagct
cctccacctcctccaccccctccacctccacccccccaaacttctatttcttcagacttc
ccaccacctcctcccctctctggtggcccaccaccacctccccctgcatccggaggagga
agaggaggaggaggaggtggaggaggagaaagtaggggggctctgctggatcagatccga
ctggggaagaagctcaaaaatgtgatagaagattctccacctccaacatcggactcaggc
gagggcatagttggtgctctcatgatggtcatgcagaagaggagtaaagtcatccattcc
tctgatgaaagcgaagatgacgccggagatgaagatgatgacgatgacgaatgggacgac
taa
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