Scomber scombrus (Atlantic mackerel): 133988371
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Entry
133988371 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Others
Others
133988371
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133988371
NCBI-ProteinID:
XP_062283991
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Position
2:3564700..3741870
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AA seq
1257 aa
AA seq
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MEREVIFCQKWHSALWFSLLMMVCLFQATKAEITCRSCQDGNKWRAQELLLNFNTHESAT
GLNGEVFGHEDGAGRSEAAGAESRRRLRCAAGSAECAPDRGEYTEQRLKRNTDNMGKAKD
EIREGEFAKIKVSHVKMSVSGQGKTGDGDDGAGPDSASHYRKRARRNSDESKVRSSGSAQ
SQHPGEGIRSAAGRRVTRSELRWSGEERRAGGKQEELKLNSSTFALTGDSSHNQAMVHWS
GQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGVKTILSYLYVSPNNKR
KIMLLTDPEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVE
FGRRWQLVHERVAPNRFYWSKMGLDKEPGLIHLETSISEGHALYVTCKLQNCTDANKGKP
FPGYIDPNSLVVQDEYVFVQVSTAGRPIYYVSATRDVFTPMKLPKYTLPKDLHVISTDEN
RVVAAVQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLA
NRKTDNQVKTHITYNRGRDWRLLQAPNKDLRGNSIHCVLPYCSLHLHLHVSANPYTSGNI
ASRDSAPGIIVASGSIGSELTTSNVSVYITSDAGNTWRQIFDEEYAVLYLDQGGALVAIR
HTPLPIRHLWLSFDEGRQWSKYSFTGTPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLV
KIDYRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPMSRCVMGKTYSVSMTSGP
CDCTEADFECDYGYERRTDGKCTPAFWFHPSVMSRSCTTGMTFLNSTGYRKVVCNNCTAG
VSVEYTARRQQCPIQAPKGLHLVTSEGTLTATLGTNVTFLVFLEEGDGAKTSITLDFGDG
HALMYSNVSSIEEGIKHIYKAVGIYRVTATGENNLGSETAVLYLHVTCQLEYIHLSAPFV
AVRNKEVNLTAVLWPSQVGTVTYIWWIGNNTEPVITLEGSVACTFSREGINTVTLQVSAG
NTILQDRKDIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIRNSLIQATGVREDQL
LVTVLQGLPTTAEFFLLPDKLLTEGKPEKSSAHLDQLSEVLLSALNQNLVQFTLRPGVQV
TVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLNVYAQMQNEK
EQEMMSPANPTEAAPSSQRDLVPSLEILDTEFNSRPIGCMKPHVHVKFSTELPTYIV
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaggtcatattttgccaaaagtggcacagtgcgctttggttttctcttttg
atgatggtgtgtttatttcaagcaactaaagctgagataacttgcaggtcatgtcaggat
ggaaataagtggcgtgcgcaggaattactgttgaattttaacacacatgaatccgcaaca
ggattaaatggagaagtttttggacatgaggacggggcagggagatccgaggctgcaggt
gccgaaagtcggcggcggctccgttgcgcagctggatccgctgaatgcgctccagatcgg
ggggaatacacagagcagaggctgaaacggaatactgacaacatgggaaaagcaaaagat
gaaattagagaaggcgagtttgccaagattaaagtttctcatgttaaaatgagtgtgagt
ggtcagggcaagaccggtgatggtgatgatggcgcaggtcctgactctgcaagccactat
agaaagcgcgccagaaggaacagtgatgagagtaaagtcagatccagcggttcggctcag
agtcaacacccaggagagggcatcagatcggcggctggacgcagagtgacacgctccgaa
ttgcgctggagcggagaggagaggagagccggtggcaagcaggaggagctaaaacttaac
agttccacattcgccttgaccggagattcatctcacaaccaggctatggtgcactggtcc
ggccagaacagcagtgtgattctgatgctgaccaaattattcgacttcaacctcaacagt
gtgactgagagttcattatggaggtcaaccgactacggagcaacataccagaagctgaat
gacaaagtaggagtgaagacaatactcagttatttgtacgtgagccccaacaacaagagg
aagatcatgctgctgaccgatccagaagtggagagcagtcttctgatcagctctgacgaa
ggagccacctaccagaagtaccggctgaacttctacatcctcagcctgctcttccacccc
gagcaggaggactggattctggcctacagccacgaccaaaagctctacagctcggtggag
tttgggaggaggtggcaactggtgcacgagagagtggctcccaatcgtttctactggtcg
aaaatgggtttggacaaagagcctggcttaattcacctggaaaccagcatctctgaagga
catgcgctgtatgtcacctgcaagctgcagaactgcacagatgccaacaagggcaaacca
ttccccggctacattgaccccaattctctggtggtgcaagatgagtatgtgtttgtccag
gtgtcaactgcagggaggccaatctactatgtgtctgctacaagagatgtctttacacca
atgaaactgcccaagtacaccttgcccaaggacttgcatgtgatcagcacggatgaaaac
cgcgttgtggcagccgtgcaggagtggaaccagaatgaaacctataacctgtacgtgtcc
gacacatcgggggtctactacactctggctctggagaacgtcgtcagcagcatgggcccg
gaaggcaacgtgatggtagacctatatgaggtagcgggaataaaagggatgttcctcgcc
aacagaaagacggataaccaagtgaagacgcacatcacctacaacagaggcagagactgg
aggttactgcaggccccgaacaaagacctaagaggaaacagcatccactgcgtgctgccg
tactgttcattacatctccatcttcacgtgtctgcgaatccctacacatctggaaacatc
gccagcagggactcggctccggggatcattgtcgcatcaggctccatcggctctgagctg
accaccagcaacgtcagtgtgtatatcacctcggatgcgggaaacacatggagacagatc
ttcgatgaggagtatgcagtgctgtatctcgaccaaggaggggccttagtcgcaataaga
cacactccgcttcccatccgacacctgtggttgagctttgacgaaggacggcagtggagc
aagtacagcttcaccggcacgcctctgtttgtggacggagtgctgggagagcctggggaa
gagactctcatcatgacaatattcggtcacgtcagtcatcgctcagagtggcagctggtg
aaaatagactacaggtccatcttcaacaggaggtgcacggaggcagattatcagacgtgg
cacctacacaaccagggtgagccgtgcctcatgggagtgaaaagaatctaccggaagctg
aagcccatgtccaggtgtgtgatggggaagacgtactctgtgtccatgacgtcaggtcca
tgcgactgcacagaggctgactttgaatgcgattacggctacgagagacggaccgacggc
aagtgcacccccgccttttggttccatccatcagtcatgtccaggagttgcaccacaggg
atgacgttccttaacagcacaggatacaggaaggtggtctgtaataactgtacagctggg
gtcagtgtggagtatacagccaggaggcagcagtgtcccatccaagcacctaaaggtctc
cacctggtcaccagtgagggcaccttaacggccacattaggcaccaatgtcaccttccta
gttttcctggaagagggcgacggggcgaagacgagcatcacgctggacttcggcgacggc
cacgctctgatgtattcgaacgtgagctccatcgaggaggggattaaacatatctacaaa
gctgtgggaatctaccgggtgaccgccaccggggagaacaacctcggctcggagaccgcc
gtgctttacctgcacgtaacatgtcagctggagtatatccatctctcagctccctttgtg
gcggtgaggaataaggaagtgaacctgactgctgttctgtggcccagccaagtgggaaca
gtcacctacatctggtggatcggaaataacacagagccagtaatcaccctagagggaagt
gtggcatgcacgttctcccgggaaggcatcaatacagtcactctgcaggtgtccgcaggg
aatactattctgcaggatagaaaagacattgctgtccatgaatattttcgttctcatctg
ctcgctttttcatcaaacctggacgatcacaaccccgatgttgcagaatggagactggac
gtgagccgagtcatcagaaactctctgatccaggctactggcgtcagagaggatcagctt
ctggtcaccgtcctccaagggttaccaacaacagcagagtttttcctcctgcctgacaaa
ctgttgactgaagggaaaccagaaaaaagctcagctcatttagatcagctctctgaggtt
ttgctcagcgccttgaatcaaaaccttgtccagttcacgttgcggccaggggtccaagtc
acagtctacgcagcacacctatcagcagcgccccttgtggacaccagtgagaaccacagt
ggctctgccatgctaatgctgctatcagtagtggttgtgggtttagctgtatttgtcatc
tacaaattcaagaggaagatcccaggcctcaacgtctatgcgcagatgcagaacgaaaaa
gaacaagaaatgatgagtccagctaatccaacagaggccgcgcctagctcacagcgggac
ttggtgccttctttggagattctggacacagagtttaactcacggcccatcggatgtatg
aaacctcatgtacatgtgaaattctccacagaactccccacatacatcgtctga
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