Scomber scombrus (Atlantic mackerel): 133988376
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Entry
133988376 CDS
T10651
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03250
Viral life cycle - HIV-1
ssco04623
Cytosolic DNA-sensing pathway
Brite
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133988376
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133988376
NCBI-ProteinID:
XP_062283996
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Position
10:18359060..18366865
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AA seq
624 aa
AA seq
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MDSRKRPLEADLTAGGSFKTPEKRVSAVPLQDSDYTRWGVEETCQYLRREGLEEWEDIFR
EQKITGVGLRYLNDAELEKIGIQYLGDRLQILHSLGKLWHVEAEQSKVFNDSIHGHVELH
PLLVKIMDTPQFQRLRNIKQLGATYFVFPGASHNRFEHSIGVGYLAGQLVQALNERQPEL
LISRRDALCVQIAGLCHDLGHGPFSHMFDGMFIRKARPEITWKHETASLEMFDYLVKDNC
LKPVMEEHGLVLPKDLDFIKEQIAGPLHTNAAQGKKWPYKGRAEDKSFLYEIVANKRNGI
DVDKWDYFARDCYHLGIQNNFDYRRFLKFARVCEVDGQKHICTRDKEVGNLYDMFHTRNC
LHRRAYQHKVGNIIETMITEAFLKADKHIQIEGKGGKKFTLSTAIDDMEAYTKLTDHVFE
QILNSSSSELAEARQILRNITCRRLYKCLGQTQPDKFMNVTREVLLSWEADLADSFPQSG
AQNVDLQPEDFVVNVIYMDYGMKEKNPINNVRFYCKNDLTTAIQIRKNQVSKLLPEHFAE
QLIRVYFKKTDDRSLEMAKKHFVQWCMNKNFSKPQDGDIIAPELTPLKASWSNNNEGEDG
EEGSSREVNWARVNGQKKAKTKLF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcggaaacgaccgctggaggctgatttgaccgccggtggcagcttcaaaaca
ccggagaagagagtgtctgctgtcccgctgcaggactcggactatacgcgatggggagtg
gaggaaacgtgtcagtatctgcgaagagagggtctcgaagagtgggaagatatatttaga
gaacaaaagatcactggtgtggggctgagatatctgaatgatgctgaactggagaagatt
ggcatacagtatcttggtgatcgcttgcagatcctgcacagccttgggaagctgtggcat
gtagaagcggagcaaagtaaggtgtttaatgatagcatccacggccatgtagagttacac
ccactcctcgtcaaaatcatggacacgcctcagttccagagactacgaaacattaagcag
cttggggcgacctactttgttttccctggagcatctcacaaccgctttgaacacagcatc
ggagtcggttacttggcaggacaacttgtacaagctctgaatgagaggcagccagaactc
ctcatttctcgtagagatgctctttgtgtgcagatagctggcctctgtcatgacttggga
catgggccattttcccatatgtttgatggcatgttcatccgcaaagcacgtccagaaatt
acctggaagcatgagactgcctctctagaaatgtttgactacctggtgaaagataattgc
ctgaaaccagtgatggaggaacacggcctggtgctccctaaggacctggacttcatcaag
gagcagattgcaggacctctgcacactaatgcagctcaaggcaagaagtggccgtataaa
ggccgagcagaggacaagtccttcctctatgaaattgtggccaacaaaagaaatggcatt
gatgtggacaagtgggactactttgccagggactgctaccacctgggtatccagaacaac
tttgactatcgccgcttcctaaagtttgccagggtgtgtgaggtggacgggcagaagcac
atctgcactagagacaaggaagtgggaaatctttatgacatgttccacacaaggaactgt
ctccacaggagagcctaccagcacaaagtgggaaacatcatagaaacaatgatcacagag
gcctttttaaaggcagataagcacatccagattgaaggcaaaggagggaagaagttcact
ctctccacagccatagatgacatggaggcctacaccaagctgacagatcatgtgtttgaa
caaatactcaactcttcctcctcggagctggctgaggcgaggcaaattctgcgcaacatc
acctgtcggcggctctacaaatgtctgggccaaacccagccggacaaattcatgaatgtc
acccgggaggtgcttctcagctgggaagcagatttggctgactcctttcctcagagtggc
gcccagaatgtcgatctacaaccggaagactttgtagttaatgtcatttatatggactat
gggatgaaggagaagaaccccatcaacaatgtgcgtttctattgcaagaatgacctaact
acagccatccagatccgtaagaaccaggtgtctaaacttcttccagagcactttgcggag
cagctcatcagagtttactttaagaagaccgatgacaggagtctggagatggcgaagaag
cactttgtgcagtggtgcatgaacaagaacttctcaaagcctcaggatggagacataata
gcgcctgagctgacccctctgaaagccagctggtccaacaacaatgaaggcgaggatggt
gaagaaggcagctccagagaagtaaactgggctagggtaaatggacaaaagaaagccaaa
actaagcttttttaa
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