Scomber scombrus (Atlantic mackerel): 133988449
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Entry
133988449 CDS
T10651
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6 isoform X1
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133988449 (chrna6)
04082 Neuroactive ligand signaling
133988449 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133988449 (chrna6)
Ion channels [BR:
ssco04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
133988449 (chrna6)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Pyr4-TMTC
Motif
Other DBs
NCBI-GeneID:
133988449
NCBI-ProteinID:
XP_062284052
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Position
2:complement(8088111..8096976)
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AA seq
451 aa
AA seq
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METNLWLRHIWNDYKLRWMPVEFDGIEFIRVPSNKIWRPDIVLYNNAVGDFLVEDKTKAL
LKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKIDLVLIGSKVNLKD
FWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINLIIPCLLISFLTV
LVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIV
ITVFVLNVHYRTPMTHTMPGWVRSVFLKVLPRIMLMRRPIDEDSKAGGLDSSGEAGGAGG
GGGGGGGKGGKKRKNSLMQQVGGGSLNCLEFGDSKLSPMEGCTGKKCPCPCQHGNETPET
TDTGKITRQLSPQSISTVVAFSVVSPEIKQAIESVKYIAENMRSRNKAKEVEDDWKYVAM
VIDRIFLWVFVTVCVLGTVGLFLQPLCGFVS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaatttatggctcagacatatatggaatgactacaagctgcgatggatgccg
gttgaatttgatggaattgagttcattcgggttccatcaaataagatctggagacccgac
attgtgctctacaacaatgctgtaggtgatttcctggtggaagataagaccaaggctctg
cttaagtttgatggtaccatcacttgggtccctccagccattttcaaatcctcttgcccc
atggacatcacctacttccccttcgactatcagaactgctccatgaagttcggttcttgg
acttatgacaaagccaagattgacctggttcttattgggtctaaggtgaacctgaaagac
ttctgggagagtggcgagtgggaaatcattgatgctccgggctacaagcatgatatcaaa
tacaactgctgtgaggagatctacccagacatcacctactccttctacatccggcggctt
cctctcttctacaccatcaacctcatcatcccttgcctcctcatctctttcctcacagtg
ctggttttctatctcccgtctgactgtggagagaaggtcacgctctgtatctctgtcctg
ctctccctcactgtgttcctgctcgttatcaccgagaccatcccctcgacatcgctggtc
atcccactgattggagagtacctgctcttcaccatgatctttgtcacactcagcattgtc
atcaccgtgttcgtgctgaacgtacattaccgcacgccaatgacccacactatgccgggc
tgggtgcgctcagtgtttctcaaagtgctgccgaggattatgttgatgcggagaccgatt
gatgaagacagcaaggctggggggttggacagcagtggggaggcaggaggagctggaggg
ggaggaggaggcggaggagggaaaggagggaagaagaggaagaatagtttaatgcagcag
gttggaggaggttccctaaactgtctagagtttggggacagtaaactatccccaatggag
ggctgcactgggaagaaatgcccttgcccctgccagcatggtaatgagaccccagaaaca
acagatacggggaagattacacgtcagcttagtccacagagcatcagtacagtggtggct
ttttctgtggtgtcaccagagatcaaacaggccatcgagagcgtcaagtacatagctgaa
aacatgagaagccgcaacaaggcaaaagaggtggaggatgactggaagtacgttgccatg
gtgattgatagaatcttcctttgggtgtttgtgaccgtgtgcgtcttgggaaccgtgggc
ctcttcctccagcctctttgtggcttcgtctcataa
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