KEGG   Scomber scombrus (Atlantic mackerel): 133988709
Entry
133988709         CDS       T10651                                 
Name
(RefSeq) ras-related protein Rab-33B-like
  KO
K07920  Ras-related protein Rab-33B
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    133988709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133988709
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    133988709
   04031 GTP-binding proteins [BR:ssco04031]
    133988709
Membrane trafficking [BR:ssco04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    133988709
 Others
  Specific organelles associated proteins
   Auto phagosome
    133988709
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133988709
GTP-binding proteins [BR:ssco04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    133988709
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU SRPRB PduV-EutP G-alpha Septin AAA_16 RsgA_GTPase AAA_24 AAA_7 AAA_33 AAA_22 NACHT
Other DBs
NCBI-GeneID: 133988709
NCBI-ProteinID: XP_062284071
LinkDB
Position
2:6554377..6557390
AA seq 242 aa
MESSLEFSNSLGSVSSLLTRSRTFKVLVIGDSGVGKTCLTHRLCAGQFLSRPEATIGVDF
RERMLDIDGEKIKLQLWDTAGQERFRKSMVQHYYRNVHAVLFLYDVSCPSSFNSLASWIE
EFRQHSLGQEIPRFLVGNKSDLRDLSRANDQVSQERAMSFAKAHNMMFFETSAKNPPNKH
INRQQGDGQAPYQQDKVEDIVIAVGAKLKRQKKPSTANALAYSGSFKVLNKKRPEKEVWT
CC
NT seq 729 nt   +upstreamnt  +downstreamnt
atggagtcatctctggagttttccaactctttgggcagcgtgtcttcactgctgactcgc
agtcggacctttaaggtgctggtgattggagactccggggtcgggaagacctgcctcacg
caccgactctgcgccgggcagttcctcagcagaccagaggccaccatcggggtggacttc
cgtgagagaatgcttgatattgatggagagaagattaagcttcagctgtgggacacggca
ggacaggagcgtttccgtaagtccatggtgcaacactactaccgtaatgtccacgcagtg
ctcttcttatatgatgtcagctgcccttccagcttcaacagcctcgcctcctggatagaa
gagttcaggcagcactccctcggccaggaaatccccagattcctggtggggaacaagagt
gatctccgtgaccttagcagggccaatgaccaggtgagccaggagcgggcaatgagcttt
gccaaggcccacaacatgatgttttttgagacatccgccaagaacccgccaaacaaacac
attaacagacaacaaggtgacgggcaggcgccttatcagcaggacaaagtggaagacatt
gtcattgctgttggtgccaaactgaagagacagaagaaaccctcaacggcaaatgccctg
gcgtacagcggctcttttaaagtcctaaacaaaaaaagaccggagaaagaggtttggacc
tgctgctga

DBGET integrated database retrieval system