Scomber scombrus (Atlantic mackerel): 133988814
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Entry
133988814 CDS
T10651
Symbol
jupa
Name
(RefSeq) junction plakoglobin a
KO
K10056
junction plakoglobin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04382
Cornified envelope formation
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133988814 (jupa)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133988814 (jupa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133988814 (jupa)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133988814 (jupa)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT
HEAT_2
Adaptin_N
ARMC9_ARM
ELMO_ARM
V-ATPase_H_N
RICTOR_N
Atx10homo_assoc
Arm_2
BORCS7
Motif
Other DBs
NCBI-GeneID:
133988814
NCBI-ProteinID:
XP_062284080
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Position
2:9905127..9924262
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AA seq
728 aa
AA seq
DB search
MAMQMGEPDSGMVKVAEWQQTMYSMDSGIQSGATTVREDDGDYTTSKHYTMTTTVTKDAP
DLDTQYTMTRAQRVRAAMFPETLEEGTTILSTQTDPSQMTNVQRLAEPSQLLKTAIIHLI
NYQDDAELATRAVPELTKLLNDEDQVVVSKAAQIVNQLTRKEASRRALMQSPQMVAAVVR
AMQNTSDMETARATASILHNLSHQREGLLSIFKSGGIPALVRMLSSPMESVLFYAITTLH
NLLLHQEGAKMAVRLADGLQRMVPLLKKSNPKFLAITTDCLQLLSYGNQESKLIILANGG
PEGLVHIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTGSSQRLMQN
CLWTLRNLSDAATKQEGMDSLLQVLVGLLSSDDLNMLTCATGILSNLTCNNSHNKTLVTQ
SNGVEALIHAILRAGEKEDVTEPAVCALRHLTSRHQQAELAQNAVRRHYGIPAIVKLLNQ
PYYWPVIKAVVGLIRNLALCPENQAPLRDAGAIPRLVNLLLKAHQDAQKHGSSAQQTYQD
GVRMEEIVEGCTGALHILARDPINRAEIANLQTIPLFVQLLYSPVDNVKRVAAGVLCELA
LDKPSAEMIDSEGASAPLMELLHSNNEGIATYAAAVLFRISEDKNSDYKKRVSVELTHSL
FKHDPAAWEMAHNSVPMDGPYADELDAGFQGYGGYAGDIPMDGMDGNMMHDEYAASMAYD
RQAYPEPY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaaatgggtgagcctgacagtggcatggtgaaggtggcagagtggcagcag
acgatgtatagcatggactcaggcatccagtctggagccaccacggtcagagaggacgat
ggcgattacaccacctccaagcattacaccatgaccaccaccgtcacaaaagacgcgccc
gacttggatacccagtacaccatgaccagagcccagcgggtgcgggctgcgatgttccca
gagacgctggaggaaggcacgaccatcttgtctactcagacagacccgtcccagatgacc
aacgtccagcgattggctgagccctcccagttgctcaagacagccatcatccatctgatc
aactaccaagacgacgccgagctggccacacgtgccgtgcctgagctcaccaaactgctc
aacgatgaagatcaggtggtggtcagcaaggcagcacagattgtcaaccagctcacgcgt
aaggaggcgtcccgccgcgcgctgatgcagtcccctcagatggtggccgctgtggtgcga
gccatgcagaacacgagcgacatggagaccgcaagggccacagccagcatcctccacaac
ctgtcccaccagagagagggcctgctctccatcttcaagtctggaggcatccccgctcta
gtccgcatgctcagctctcccatggagtctgtgctgttctatgcaatcaccacactccac
aacctgctgctgcaccaggagggggctaagatggctgttcgtctcgccgacggcctgcag
aggatggttcccctgctgaagaagagcaaccccaagttcctggccatcaccacagactgt
ctgcagctgctgtcctatggcaatcaggagagcaagctcatcattcttgccaacgggggt
cccgagggtcttgttcacatcatgagaaactacagctatgagaagctgctgtggaccaca
agccgtgtgctcaaagtcctctctgtgtgccccagcaacaagcctgccattgtggaggct
ggtgggatgcaggctctcggtaaacacctcacaggctccagccagcgtctgatgcagaac
tgtctgtggacactcaggaacctgtctgatgctgccaccaagcaggagggcatggacagc
ctgctgcaggtgctggtgggcctgcttagttcagatgaccttaatatgctcacttgcgcc
actgggatcctgtctaacctcacgtgcaacaactcccacaataaaactctggtcacccag
agcaacggcgtagaggctctgatccacgccatattgcgcgccggtgagaaagaggatgtg
actgagcctgccgtttgtgctctgcgccacctgacttcacgccaccaacaggctgagctg
gcacagaatgccgtgaggaggcactacggcatccccgccatcgtcaagctgctcaaccag
ccctactactggcccgtcattaaggctgtggttggtctgatccgtaacctggccctgtgc
ccagagaaccaggcccctctgagggatgcaggtgcgatcccccgcctggtcaacctgctg
ctcaaagcccaccaggacgcccagaaacatggctcatccgcccagcagacataccaggat
ggagtgaggatggaggagattgtggagggctgcacaggagctctgcacatcctggccaga
gatcccatcaacagagcagagatcgccaacctgcagaccattcctctatttgttcagctt
ctctactcaccagtggacaacgtgaagcgtgtggcggccggcgtgctgtgcgagctggct
ctggacaaaccgtcagctgaaatgattgacagcgaaggagcgtcggctccgctgatggag
ctgctgcactccaacaacgagggcatcgctacttatgccgcagctgtgctcttccgcatc
tccgaggacaagaactcagactacaagaagcgagtttctgtggagctcacacactctctg
ttcaagcacgacccggctgcatgggagatggcccacaacagcgtccccatggatggaccc
tatgcagatgagcttgatgctggtttccaaggctatggaggatatgcaggtgatataccc
atggacggcatggatggaaatatgatgcatgacgaatacgcagccagtatggcctacgac
agacaagcgtaccccgagccttactaa
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