Scomber scombrus (Atlantic mackerel): 133989064
Help
Entry
133989064 CDS
T10651
Symbol
chs1
Name
(RefSeq) chitin synthase 1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00520
Amino sugar and nucleotide sugar metabolism
ssco01100
Metabolic pathways
Brite
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
133989064 (chs1)
Glycosyltransferases [BR:
ssco01003
]
Polysaccharide
Structural polysaccharide
133989064 (chs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133989064
NCBI-ProteinID:
XP_062284101
LinkDB
All DBs
Position
1:complement(16135247..16159441)
Genome browser
AA seq
1430 aa
AA seq
DB search
MEELRNRGKKREGRHRDTWDPFQLNPIGAEKEQKRTCFQLAQYLVAVIVGLAVLTSAVIA
KGSLLVLSTLSSPDSLRTNKERQFYMLMLVFCLVWPNFLVFLKSLWRCAFKSFVQPNMKT
MSFICVIECLVSLGTSVLVLVVMPQFDVLTNLFISGGVCIMSAILQIVFRLQRETWKIVF
PICSLILTVAGYCLLGIDYYVRVKSHVENQGSESFIYIAIGIFSSLLISLCWWENPLQAT
NRMPETLSELDGFRDFVFVISSILRILVIGAVYLLNHALIEKSIEWSDFNLLDGDWELLQ
IGLVLFFLQALCSAACHWFGVVACKIHAVRMSFAVPVCCTGPAVLLLGLILFLTQAQKLD
GAKHGSIIEFCSSLTHLGKVNTTPVVLLEITKSICKTSLNSHYLQWPFSMLALEGVCMWA
GFVTCTYYVWKIQVQRIERTSQLFVRRLYESAFIDLSLLLNTKMKVPRARNQDSHDDIQK
CVIYLCATMWHETYDEMLKILTSMFRLDRYRGDPKEDHKDCFDFECHIFVDDAFMTEKET
GKRLVNSYVNDLVQVVIEVYRVFTNKEPDDVSVIDAPYGGRLMFVMPEGNMLYVHLKDKA
LIRNKKRWSQIMYLYYLLGWKGYIAKNPQKITRQNNPCRESLISMYGEIYMLPQHDSDQK
RKFISDDHTYILALDGDTDFQPKAVILLVDRLRMYDNVGAACGRIHPTGMGPMVWYQKFE
YAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSALMDDNVMKRYTTTATRASEYVQYDQGED
RWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLANTLDLLHSGAETVK
RNSSISRLYIFYQMFTVGSSILGPASVTLMIAGAFQFVFKMTGTLSIVVASIPPVFYIIV
CFIAKANNQITIAAIMSILYAFLMTASLFSIIGDMVLQGTFLTPTGVFLVSMTIMYLVTA
LLHPEEFGMIIYGLMYFICIPSGYLLLTIYSLVNMHIVSWGTRESNKGDGEVKKKHNTLC
DKTCRLCCWDMKIQISQETDNLMIQQITGQTAQLGPPVPITNGEITEQTASKPEPQVRLD
NTKEEEKEKGKKTEEESNKIPTGEQKKKEAQNSDAGSSGSADYAEKLSISLSSSDEENYE
DDDDMVMNADETEEVPISAWVEPVKQEFLKKLTYANMKRNLQEQIRYALRNKDEDDVCEE
LVLMLTDTLNGELSEVGPEDILEESRLEELEATLTQHARRILKTSHVEKLEKRVRVAIQK
TLTAPQVQRLDEGEHDFWTKLLDRYLKPIVDTKAHLDDVTRELKSLRNKAVFLYFIINVL
WVVATFFLQAIGNDVISIKIPKLYPNGTASGDYLKVEPLSLMFLLSFAVLLVIQFLAMLY
HRIYTLIHVVSYRSTEKDYKPKNEVDPDDGNGLTIGNTDANELYITMEDL
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattaagaaaccgaggaaagaaaagagagggacgacacagagatacatgggat
ccattccagctgaacccgataggagctgagaaggaacagaagagaacatgtttccaactg
gcccagtacctggtcgctgttattgtggggttagcagtcctgaccagtgctgttattgca
aagggctctctcttggtgctatcgacattgtccagtccagactccctgcgcaccaacaag
gaaaggcagttctacatgctgatgctggtgttctgccttgtctggcccaacttcctggtg
tttttgaaatcactgtggaggtgtgccttcaagagctttgtacaacccaacatgaagacc
atgtcgtttatctgtgtcatcgagtgtctggtgtcgcttggtacttcagtcctggtgctc
gtcgttatgcctcagtttgacgtattgactaatctcttcatcagtggaggtgtctgcatt
atgtctgcgattctgcagattgtattcagactacagagagaaacttggaaaattgtgttc
ccaatctgctccctcattctcacagttgctggttactgcctcctgggaattgactactat
gtgcgtgtaaaatcacatgtggagaaccagggctctgagagcttcatctacattgcaatt
ggaattttctcttcactactcatctccctctgctggtgggaaaatccactgcaagctaca
aaccgcatgccggaaacattgtcagagttggacggtttcagggactttgtatttgtcatc
agcagtattctcaggatactggtgataggagcggtatacctgttgaaccatgctcttatt
gagaaatcaatcgaatggtcagactttaacctactggacggagactgggaattattgcaa
ataggactggtgctgtttttcttacaggcattgtgctcagcagcctgccactggtttgga
gtggtggcttgtaagattcatgcagtcaggatgagttttgcagtgccagtatgttgcacg
ggacctgctgtgctactgttgggattgatacttttccttacccaggcacaaaaattggat
ggagcaaagcatgggagcataatagagttttgttcaagcttgacccacctgggcaaagtg
aacacaacccctgtggtactattagaaatcaccaagagcatctgcaagacctcacttaac
agccactacttgcaatggcctttttccatgcttgcactcgagggagtgtgtatgtgggca
ggcttcgtcacgtgtacttactacgtatggaagatccaggtccagcgtatagagagaacc
tctcagctctttgttcgtcgtctctatgaatctgctttcattgacctgtctctgctgctc
aacaccaagatgaaagtgccacgagcccgaaatcaagacagccatgacgacatacagaaa
tgtgtgatctatctttgtgccaccatgtggcatgagacctacgatgaaatgctgaagatt
ctgacctccatgttcaggttggaccgctatcgaggcgatccaaaggaggatcataaggac
tgttttgactttgagtgtcacatttttgtggatgatgcttttatgactgaaaaggaaaca
ggaaaaaggctggttaattcttacgtaaatgacttagtccaggttgtcatagaggtttat
agggtgtttaccaacaaagaacctgatgatgtgtcggtcattgatgccccctatggtggc
aggctgatgtttgttatgccggaaggcaacatgctctatgttcacctaaaagataaagct
ctgatcaggaacaagaaaagatggtctcagataatgtatctttattatctgctcggctgg
aagggctacattgccaagaaccctcagaagatcacacgccagaataatccatgcagagaa
agtctgatctcgatgtatggtgagatttacatgttgccccaacatgacagtgaccagaag
agaaaattcatctcagatgaccacacttacatcctggctcttgacggagacactgatttc
caacctaaagctgtgattctgcttgttgacaggttgaggatgtatgacaatgtaggagca
gcctgtggtagaattcatcctacaggaatgggtcccatggtgtggtaccagaagtttgag
tatgctgtgggtcactggctacaaaagacagcagaacacgtgtttggctcggtgctgtgc
agtccaggatgtttcagtctgtttagaggctcggccttgatggatgataatgtcatgaaa
agatacaccacaactgcaacaagagcttccgaatatgtgcaatatgaccaaggggaggat
cgttggctatgtactttgctactgcagcaagggtggcgtgttgagtacaatgctgcctca
gatgcctacaccaactcaccacaggagttcaaagagttttacaaccagaggagacgatgg
gggccctccactctggctaatacactggaccttctgcacagtggtgcagaaactgtgaag
agaaactcctccatatccaggctctatatcttctaccagatgtttactgttggttcctct
atccttgggccagcgtctgtgactctcatgatagcaggtgctttccagtttgtcttcaaa
atgaccgggacactgtccatcgtcgttgcaagcattcctcctgtgttctacatcatcgtc
tgttttatcgccaaggcaaataatcaaataaccattgctgccattatgagtattctgtat
gcattcctcatgaccgcatccttattctctatcatcggtgacatggtgcttcagggcacc
ttcctgacccccactggcgtgtttttggtttctatgacaatcatgtacctggtgacagct
ttattacacccagaggagttcgggatgattatctatggtctgatgtatttcatctgtatc
cccagtggataccttctgctgaccatctactcactggttaacatgcacattgtgtcctgg
ggcacaagggaatccaacaagggagacggagaggtgaagaagaaacataatactctgtgt
gataagacctgtcgactctgctgctgggacatgaagatccagatatcccaggaaacagat
aatctgatgattcagcaaatcacaggccagactgcacagctaggccctcccgttccaatc
accaacggagaaattaccgaacagacagcctcaaagccagagccacaagttagactcgac
aacaccaaagaagaagaaaaagaaaaaggaaaaaaaactgaggaggaatctaacaaaatc
ccaactggtgaacaaaaaaagaaagaggcacaaaattctgatgctgggtccagtggcagt
gctgactatgctgaaaaactgagcatatcactgagttcatctgatgaagaaaattacgaa
gacgatgatgacatggtcatgaacgcggatgagacagaggaggttcctatcagtgcctgg
gttgaaccggtgaaacaagagtttttgaagaagctgacttatgccaacatgaagagaaac
ttacaagaacaaatacgatacgcgctgcgcaacaaagatgaggacgatgtgtgtgaggag
ctggtcttaatgctaacagacactcttaatggagagctcagcgaagtggggcctgaagat
atcctggaagaaagccggctggaagaattagaggctactctgacacagcatgctcgacgc
atccttaagaccagtcatgtagagaaattagagaagagagtcagagtcgccatccagaaa
acactaactgccccgcaggtgcaaaggctggatgagggtgagcatgacttctggaccaag
ttactcgatcgctacttgaaacctattgttgacactaaagcacatctggatgacgtcaca
agagagctaaagtcactgcgcaacaaggctgtcttcctctatttcatcatcaacgtgctc
tgggtggtagctaccttcttcctgcaggccattggaaatgatgtcatcagcattaagatc
ccgaaactgtatccaaacggtactgcatctggagactacctcaaggtggaacctctcagt
ctgatgttcctgttgtcttttgctgttcttctcgtcatccagttcctggccatgttatat
cacaggatctacactctgatccatgtggtgtcctatcgcagtacagagaaggactacaaa
ccgaaaaatgaggttgaccctgatgatggtaatggcttaactattgggaacaccgacgcc
aacgaactttacatcaccatggaagacctgtaa
DBGET
integrated database retrieval system
