Scomber scombrus (Atlantic mackerel): 133989368
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Entry
133989368 CDS
T10651
Symbol
ift56
Name
(RefSeq) intraflagellar transport protein 56
KO
K19685
intraflagellar transport protein 56
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133989368 (ift56)
Cilium and associated proteins [BR:
ssco03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
133989368 (ift56)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_16
TPR_2
TPR_Slam
TPR_9
TPR_6
TPR_7
Coatomer_E
SRP_TPR_like
TPR_26
Motif
Other DBs
NCBI-GeneID:
133989368
NCBI-ProteinID:
XP_062284121
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Position
2:complement(14348892..14358510)
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AA seq
557 aa
AA seq
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MILSRVKPAVGGEPPVSISEKKKKNKTKVPRVDEYLQQRDYLGALTLLEFQRSIGEKEEH
ADLWIGFCAFHLGDYKRAMEEYKALTMKPECSDSVWVYLACALFFLGLYKEAEEAASKGP
KSPLQNRLLFHLAHKFNDEKRLMGFHQNLEDVTEDQLSLASIHYMRSHYQEAIDIYKRLL
LQNRDFLALKVYVALCYYKLDYYDVSQEVLAVYLQSIPDSTIALNLKACNHFRLYNGKAA
EAELKNLIDISSCSFEFAKELIRHNLVVFRGGEGALQVLPPLIDVIPEARLNLVIYYLRQ
DDVQEAYNLIQDLVPTTPQEYILKGVVNAALGQEIGSRDHLKIAQQFFQLVGGSASECDT
IPGRQCMASCFFLLRQFEDVLIYLNSVKGYFYNDDTFNFNYAQAKAALGNYKEAEEIFLL
IQSEKIKNDYVYLSWLARCYIMNQKGRLAWELYLKMGTSSDSFSLLQLIANDCYKMGQFY
YAAKAFDALEKLDPGSNYWEGKRGACVGVFQLILANKESKEILKEVVLLLRNSGNPQVEY
IIRALRKWAKDNRVLLS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatcctctctcgcgtaaaaccagccgtcggaggagagccacccgtgagcatcagtgag
aagaagaagaaaaacaagaccaaggttccccgagtggatgaatacctgcaacagagagat
tacctcggggccttaacactgttagagtttcagagaagtattggagagaaagaggaacat
gcagacctttggattggcttctgtgcttttcacctgggtgattacaagagagctatggag
gagtacaaagctctgaccatgaagcctgaatgttctgatagtgtgtgggtctacctggcc
tgtgctctgttttttctggggctctataaagaggctgaagaggctgcatctaaagggccg
aagtcccctcttcaaaaccggctccttttccacttggctcacaagttcaacgacgagaag
aggctgatgggcttccatcagaacctggaggatgtgacagaagaccagctgagcttggca
tccatccactacatgcgctcccactaccaggaggctatagacatctataaacgccttcta
ctgcagaacagagatttcctggctctgaaagtctacgtggctctgtgttactacaagctg
gactactatgatgtgtcccaggaggtgttggctgtgtacctgcagagcatccctgactcc
actattgccctcaacctcaaggcctgcaaccacttcaggctctacaacggcaaggcagcg
gaggcggagttgaagaacctaatcgacatctcctcatgctcctttgagtttgctaaggag
cttatccgacacaacctggtggtgtttcgtggtggggagggggcgttgcaggtgctgcct
ccactgatcgatgtgatccctgaggctagactcaacctggtcatctactatctcagacag
gatgacgtccaggaggcctacaacctcatacaagatttggtgccgacaacacctcaggag
tatattttgaaaggagtggtaaacgctgcattgggacaagaaattggatcaagagatcac
ttgaaaatcgctcagcagttctttcagctggtcggggggtcagccagtgaatgcgacact
attcctggcagacagtgcatggcctcctgcttcttcctcttgagacagtttgaagatgtt
ctcatatatctcaactctgtcaagggatacttttataatgatgatacgttcaacttcaac
tatgctcaggctaaagcagcccttggcaactacaaagaagcagaagagatttttcttctg
attcaaagcgaaaagatcaagaatgactatgtttatctcagctggctggcacgctgctac
ataatgaaccagaagggtcggcttgcctgggagctctatctgaagatgggcacttcctct
gattccttcagtctgcttcagctcattgccaacgactgctacaagatgggccagttctac
tatgcagccaaagcattcgatgcactggagaagctggacccaggatccaactattgggag
ggcaagagaggagcatgtgttggcgtcttccagctcatactggcgaacaaagagtccaag
gagatacttaaagaggtggtgctcctgctgcgaaactctggaaacccccaggttgaatat
atcatcagagctctgaggaagtgggcaaaagacaacagagtcctcctctcgtga
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integrated database retrieval system
