Scomber scombrus (Atlantic mackerel): 133989994
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Entry
133989994 CDS
T10651
Name
(RefSeq) neuronal-specific septin-3-like isoform X1
KO
K16938
septin 3/9/12
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133989994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133989994
04812 Cytoskeleton proteins [BR:
ssco04812
]
133989994
04147 Exosome [BR:
ssco04147
]
133989994
Cilium and associated proteins [BR:
ssco03037
]
Motile cilia and associated proteins
Sperm associated proteins
133989994
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
133989994
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133989994
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
AIG1
GTP_EFTU
Roc
Dynamin_N
AAA_16
ABC_tran
Ras
AAA_22
NB-ARC
URGCP_GTPase
AAA_29
FtsK_SpoIIIE
IIGP
AAA_7
P-loop_TraG
Sigma54_activat
FeoB_N
Motif
Other DBs
NCBI-GeneID:
133989994
NCBI-ProteinID:
XP_062284170
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Position
2:15453741..15514747
Genome browser
AA seq
606 aa
AA seq
DB search
MERDRIAALKRSFEVEDVDTSSHSSPGSRRTTNSPHRNAMSPTSIYYRDLGTANPATNNN
NLNYTQPRSIMGGGGPKTPEPVSRRSELSIDISSSSNKQVDNITSPASTRFGSNSALKRP
EVLGHSKTPEMGHKREVTFAKTPTESTVIRRNEGNNNNNGTSRTPEQNHIRKFEPPSPGD
VRKPDISITRAPPENNGHHTAVHHPHHPNPHHNTIVTTFRSSSPNHAGRKSPNPDRSEVN
LSHGNMSESAKPHQPNPQGKGEKTHNSDFSYVGIDAILEQMRRKAMKQGFELNIMVVGQS
GLGKSTLMNTLFKSKVSRKSVQLNSEERIPKTVEIKSISHDIEEKGVRMKLTVIDTPGFG
DQINNENCWLPIMKFINDQYEAYLQEEININRKKRIPDSRVHCCIYFIPPTGHCLRPLDV
EFMRRLSKVVNIVPVIAKADTLTLEERDYFKQAIREELRANGIDVYPQKEFDEDAEDRMI
NDKIREMIPFAVVGSDQEYQVNGKKILGRKTKWGTIEVENIAHCEFAYLRDLLIRTHMQN
IKDITGSIHYETYRVRRLNESNAHFSSHPSDHPTVQPKTNGQPEEKPKATQANGMAAQHE
ALSHEM
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagacagaatagccgctctgaagaggtcctttgaggttgaggatgtcgacact
tcatctcattcctcccccggctcccgtcggacgaccaactcccctcaccgtaatgccatg
tctcccaccagtatttactaccgtgacctaggcactgccaaccccgccaccaacaacaac
aacctcaactacacccaaccccgctccatcatgggtggaggaggccccaagacccctgag
cctgtgtcacgccgctctgaactttccattgacatctcctcttcttccaacaagcaggtg
gataacatcaccagcccagcctccacaagattcggaagcaacagcgccttgaaacgtccc
gaagtccttggccactccaagacccctgagatgggccacaagagggaggtcacttttgcc
aagacgcctactgagtccacagtgatacgccgtaatgaaggcaacaataacaacaatggg
accagccggacccctgagcagaaccacattcgcaagtttgagccccccagtcccggggat
gtccgtaaacctgatatcagcattacccgagctccaccggagaacaacggccaccacaca
gctgtacaccacccacaccacccaaaccctcatcacaacaccattgtcaccaccttccgc
tcctcctcgcccaaccatgctggacgcaaatcccccaaccctgacaggtcagaggtcaat
ctgagccacggcaacatgtctgaatccgccaagccccaccaacccaacccacaaggtaag
ggagagaagacccacaacagcgacttcagctatgttggcatcgatgccatactggagcag
atgaggaggaaggccatgaaacagggctttgagctcaacatcatggttgtgggacaaagc
ggccttgggaagtccactctgatgaacacactgttcaagtccaaggtgagccgtaagtca
gttcagctcaattcggaggagaggatccctaaaacggtcgagatcaagtccatcagtcac
gatattgaggagaaaggagtgaggatgaagctgacagtaattgacactcctggctttggg
gatcagatcaacaatgaaaactgctggctgcccattatgaagttcatcaatgaccagtat
gaagcgtacctgcaggaggaaatcaacattaacaggaagaagaggatccctgattccagg
gtgcactgctgcatatacttcatacctcccactggacactgtctgaggcctctggatgtg
gagttcatgaggcgtctcagtaaggtggtcaacatcgtccctgtcatcgccaaggctgac
acactcaccctggaggagagagactactttaagcaggcgattagggaagagctgcgagcc
aacgggattgatgtttatcctcagaaagagtttgacgaggacgcggaggacaggatgatc
aatgacaaaatcagggagatgatcccttttgctgtggtgggcagtgaccaggagtaccag
gtgaacgggaagaagattctggggaggaaaacaaagtggggcaccatagaggttgagaat
attgcacactgtgagtttgcttacctgcgagacctcctcattaggacacacatgcaaaac
atcaaagacatcacaggcagcatccactatgagacatatcgtgtccgccggttaaatgaa
tccaacgcccatttcagctctcacccatctgaccatcctactgttcagccaaagaccaac
ggccagcctgaggagaagcccaaagccacacaggccaacggaatggctgctcagcatgaa
gccctgtcccatgagatgtag
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