Scomber scombrus (Atlantic mackerel): 133990151
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Entry
133990151 CDS
T10651
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04382
Cornified envelope formation
ssco04510
Focal adhesion
ssco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133990151 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133990151 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133990151 (lamc2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Fib_alpha
Baculo_PEP_C
T3SS_ATPase_C
COG3_N
Telomere_reg-2
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
133990151
NCBI-ProteinID:
XP_062284310
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All DBs
Position
11:30610394..30625820
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AA seq
1138 aa
AA seq
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METDSVAGDVEPFPGLSLLLDAVSQQQGWVRVHASVHCKCNGRSRYCIRYAGGLQCFNCQ
GNSEGRHCERCKPGFYQQGAKLSCTACDCNPTGSVSAVCDSRGRCSCKEGVMGERCDRCR
DGLIGPDGCSQSRQPREDSGSRSPLCFCYGHSSSCSDQSAYSVHDITSNFAKGPDGWWVA
TAQAVTPDNVHFRWSPKHQDLEVISKNSLPVYLYAPAPYLGNQVLSYGQNLSFSLRLDRG
VRHPSTNDVVLEGSGLRVSASLGDLRSIVPCGQKIVYSFRLDERAGSRWKPQLSSFQFQT
LLQNLTAIKIRATFGDNGRGYLDNVKLGSARRGPGSPAGWVQTCSCPQGYEGEFCERCSA
GFTRRSPADGAFSPCEPCSCRGGSCDPQTGDCYSADETPADRSCSEGFYRDPLQPTSCRK
CPCAEGVSCSLPAGAQEPRCDRCPTGTTGSRCDVCEEGFHGDPGRGDSVLSPCRRCECNG
HIDIHVAGSCDRRSGECLKCLNNTEGSSCEKCRRGFFHSRPNDACKPCDCDVSGSESGQC
DDSGRCRCRPGFDGSRCQRSDCPACFSPVKAKMDAYAAKLKDLERLFSDMDGGLKPTNSD
EMEAALRATEQLVSNLQDTTDQLTEMEEGLKSRLASISRSQLTEGQEIQNMAAAADDIRR
LQQTYGTKEATVQTLTKEMRQKLEAAKSILQSLEFPASDAPLGSNALSTLVQTAMSLADK
HQTKADTVERTANDALRDSEKSLALVRTLMNKENKVKETIGDLKTTYDQISAQVKGFENQ
ATRLSGEARDESRMADGMLKDIANMEREIPSSLKVEVDAMMTRLVGLKESVDQSVPEYEA
LQDSVQRDKTTAEDLLAKGKAAQQDFNTLLDRVNVAKAETEGALQRINSNMGDLDESLAT
LKGFDQQIAGSKAQADVAIKRLPAINSTIQQAVRNNGETVSILGDVSNNYNAALGTINLL
ENSLNSLEGSVGSLPTHTHIVRDVKNLNEGASGLRKIAGTTARDVAAELEKARRQEVNAG
EAAVGAGAAFNNAKQTRDAVGKTLRDVSNLLAMMNQPGVVDESRLKELEDSLADAQRDVD
DVLKPRLRDMEDQEAAHRRRLSGINVDIDTILADIANLEDILESIPNGCFNSPPIEEP
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgactcggtggccggcgacgtggagcctttccccggtctgagcctcctgctg
gacgccgtgtcccagcagcagggatgggttagagtgcacgcgtcggtgcattgtaagtgt
aacggcagatctcggtactgcatccgctacgctggaggtctgcaatgcttcaactgtcag
ggcaactcagagggccgccactgcgagcgctgcaagcctggcttctaccagcagggggcg
aagctgagctgtacggcctgcgactgtaaccctacaggttcggtcagcgccgtgtgtgac
agcagggggcgctgcagctgtaaggaaggagtcatgggagagagatgcgaccgctgcaga
gacggactgatcggacccgacggatgttcacaaagccgtcagcccagagaggattctggg
agtcgtagtcctctgtgtttctgctacggtcacagcagcagctgctccgaccaatcggct
tactccgtccatgacatcacctccaacttcgccaaaggtcccgatggttggtgggtagcg
acggctcaggccgttacccccgacaacgtccacttccgctggtccccgaagcatcaggac
ctggaggtgatctctaagaacagtctgccggtttacctgtacgctccagctccttacctt
gggaaccaggtactgagttacggtcagaacttgtcgttctctctgcgtctggaccgagga
gtcagacatccgtccaccaacgacgtggttctggaaggatccggtctgagagtgtcggcg
tcgctgggagacctgcgctccatcgtcccctgtggacagaagatcgtctacagcttcaga
ttggacgagcgagccggcagcaggtggaaacctcaactctcctccttccagttccagacg
ctcctccagaacctcaccgccattaagatcagagcaacgttcggagacaacggacgcggt
taccttgacaacgtgaagctgggctcggcccggcggggccccgggtctcctgccggctgg
gtgcagacctgcagctgtcctcaggggtacgagggtgagttctgtgagcgctgctcggcc
gggttcactcggaggagcccggcagacggagccttcagcccctgtgagccgtgcagctgc
agggggggcagctgcgaccctcagaccggagactgctactctgctgatgagactccagcc
gaccggagctgctcggaggggttctacagagacccgctgcagcccacatcctgcaggaag
tgtccctgtgcagagggggtgtcctgctcgctgcctgctggagctcaggagcctcgctgt
gaccgctgccccaccggcaccaccggctctcgctgtgacgtctgtgaggagggtttccat
ggcgaccccgggcgcggcgacagcgtgctcagcccctgccgacggtgcgagtgtaacggg
cacatcgatatccacgtggcgggaagctgcgaccgacgcagtggcgagtgtctgaagtgt
ctgaacaacacggagggaagcagctgtgagaaatgtcggagaggtttcttccacagccgg
ccgaacgacgcctgcaaaccgtgcgactgcgatgtttcgggctcagagtcgggtcagtgt
gatgattcgggtcgctgtcggtgccgaccgggcttcgacggttcaaggtgtcaacggtcc
gactgtcccgcctgcttcagccctgttaaagccaagatggatgcgtacgctgccaaactg
aaggacttagagcgactcttctcagacatggacggaggtttgaaaccgaccaacagcgat
gagatggaagctgctctgagagctacggagcagctggtgagcaacctgcaggacacaacc
gaccagctcacagaaatggaggagggtctgaagtctcgcctggcgtcgatcagccggagt
cagctgacagaaggccaggagatccaaaacatggccgccgccgccgatgacatcagacgc
ctgcagcagacgtacgggacgaaggaggcgacggtccaaacgctgacgaaggagatgaga
cagaaactggaggcggcgaagtcgatccttcaatcacttgagtttcctgcttcagatgct
ccgctgggatccaacgctctctctacattggtgcagacagcgatgagcctggctgacaaa
catcagacgaaggccgacacggtggaacgaaccgccaacgacgctctgcgagactcagag
aagagtctggctctggtccggacgctcatgaacaaagagaacaaagtcaaggagacgatc
ggagacctgaaaaccacgtacgaccagatctcggctcaggtgaagggttttgagaaccag
gcgacccgtctgagcggcgaggcccgagacgagagccggatggcagacggcatgctgaaa
gacatcgccaacatggagcgagaaatcccatcgtccctgaaggtggaggtggacgccatg
atgacccggttggtcggtctgaaggagtcggtggaccagagcgtcccagaatacgaggcg
ctgcaggacagcgtgcagagagacaagaccactgctgaggatctgctggctaaaggaaaa
gctgctcagcaggacttcaacacgctgctggacagagtcaacgtcgccaaggctgaaacc
gaaggcgctctgcaacgcatcaacagcaacatgggcgatctggacgaatcgctcgccacc
ctgaaagggttcgaccagcagatcgccggcagcaaagctcaggctgacgtcgccatcaag
cgtcttcctgccatcaactccaccatccaacaggccgtcagaaacaacggagagacggtt
tccatcctgggagacgtgtccaacaactacaacgctgcactcggaaccatcaacctgctg
gagaactctctcaacagtctggagggatccgttggctctttgccgactcacacccacatc
gtgagagacgtcaaaaacctgaacgagggagcaagtggtctgaggaagatcgcaggcacc
acagctagagatgtggctgcagagctggagaaggccaggaggcaagaggttaatgctgga
gaggctgccgtcggagcaggtgcagctttcaacaacgccaaacagaccagagacgctgtg
ggaaaaacactgcgagacgtcagcaacctgctggccatgatgaaccagcccggcgttgtg
gacgagtcgcgtctgaaggagctggaggactctctggccgacgctcagagggacgtagac
gacgtgctgaagcctcggctgagagacatggaggaccaggaagctgcacatcgccgccgg
ctgtctggcatcaacgtggacatcgacaccatcctggcagacatcgctaacctggaggac
atcctggaatccatccccaatggctgcttcaacagcccgcccatcgaggagccctaa
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