Scomber scombrus (Atlantic mackerel): 133990164
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Entry
133990164 CDS
T10651
Symbol
pex5lb
Name
(RefSeq) LOW QUALITY PROTEIN: PEX5-related protein
KO
K13342
peroxin-5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133990164 (pex5lb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133990164 (pex5lb)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133990164 (pex5lb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_8
TPR_2
TPR_17
TPR_CcmH_CycH
TPR_19
TPR_11
TPR_16
TPR_14
CFAP70_mid_TPR
TPR_9
TPR_12
TPR_20
RMD1-3
CFAP70_TPR_C
ANAPC3
ARM_TT21_5th
DUF4315
TTC22_C
CIA30
Motif
Other DBs
NCBI-GeneID:
133990164
NCBI-ProteinID:
XP_062284318
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All DBs
Position
11:complement(31484438..31503696)
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AA seq
594 aa
AA seq
DB search
MVLKELPGKKASSEGNPLLTVTTKLVGEQQESRPLLSPSIDDFLLESRSDSASSRPLTSN
TAVLSTALDLVDLSEPGDSSGGSSRPQRSPLRRKGSSRSPRRRARPDETELIQVEVEQLP
ASPRTPERISLDSVSLSSPLDKWDEVNLDVEDGCRRRYEKRCTSHHSSSELLWSAEFKTD
PQNKNCFDIITASMIWTSYHPQQDCGASRQCRRTRSLMGRNESLEDEFVRAKAAVESDVE
FWDKMQAEWEELARRNWLDDTEDQQPITASVSPAEKAYFFNTNNPYRDWPNAFAEGQEKA
REGDLNAAVLLMEAAILQDPQDSEAWQVLGMTQAENENEQAAIVSLQRCLELSPNNLAAL
MALAVSFTNSGLQREACDALRRWISHNPRYRHLVQSRRSPLQGSPALPRRGPPHATKGRV
CSSQLQEVLLLFQEAAHMNLDCVDPDLQTGRGVLFNLSSDFNKAVEAFTAALSVRPQDYL
LWNRLGATLANGNRSEEAVEAYTRALELQPGFIRSRYNLGISCINLGAHREAVSNFLAAL
NQQRTQQHCSLQQSTNIWTALRIAVSMMDRPDLVQAASLGDLDLLLRVFNLEDV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaaggagcttcctggtaaaaaggcatcctcagaaggaaaccccctcctcacc
gtgacaaccaagctggtcggcgagcagcaggagagtcgacctctgctgagtccttccatc
gatgacttcctgttagagagccgcagcgactctgcttccagccgaccgctcacctccaac
acagcagtcctgtccacagctctggacctggtggaccttagcgagccgggggacagcagc
gggggcagcagtagaccgcagaggagccctctgaggaggaagggcagctccaggagtcct
cgacggcgggccagaccggatgagacggagctgatccaggtggaagtagagcagcttcct
gccagtcccagaacacctgagaggatttctctggactcagtcagtctgtcgtctcctctg
gataaatgggacgaggtgaacctggacgtggaggacggctgcaggaggagatacgagaag
agatgcacctcccatcactcgtccagcgaactgctgtggtctgcagagtttaaaactgac
ccgcagaacaagaactgcttcgacatcatcacagcttcgatgatctggacttcatatcat
ccacaacaggactgcggggcgtccagacagtgcagacggactcgttccctgatgggcaga
aatgaatctctggaggacgagtttgtccgagcgaaggctgctgtggagtcggacgttgag
ttctgggacaagatgcaggcggagtgggaggagttggcacgcaggaactggttggacgac
accgaggatcagcagccaatcacagcctccgtctcgcctgctgagaaggcttacttcttc
aacactaacaacccgtacagagactggcccaacgccttcgctgagggtcaggagaaagct
cgggagggagacctgaacgctgccgtgctgctgatggaagccgccatcctgcaggaccct
caggactcagaggcgtggcaggtgctggggatgacgcaggctgagaacgagaacgagcag
gcggccatcgtgtctctgcagaggtgtctggagctgagtcctaacaacctggcggctctg
atggcgttggcggtgagcttcactaacagcggcctgcagagggaggcgtgtgacgcgctg
cgccgctggatcagccacaacccccgataccgacacctggtgcagagccgcaggagcccg
ctacagggttccccggccctgccgcgtaggggccccccccacgccacaaaggggcgtgta
tgtagctctcagctgcaggaagtgctgctactgtttcaggaagcggctcatatgaatctg
gactgtgtggatccggatctgcagactggacgcggcgttctgttcaacctgagctctgat
ttcaacaaagcggtggaggcgttcactgctgcactgtctgtcagaccacaggactacctg
ctgtggaaccgcctcggcgccacgctggctaacgggaaccgcagtgaggaggcggtggag
gcttacaccagagctctggaactacagccgggattcatccgctccagatataacctggga
atcagctgcattaacctgggagctcacagggaggcggtcagtaacttcctggcggctctg
aaccagcagcggactcagcagcactgcagtctgcagcagtccaccaacatctggaccgct
ctgcgtatcgccgtctccatgatggaccggccggacctggtccaagccgccagcctggga
gacctggacctgctgctgagggtcttcaacctggaggacgtctga
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