Scomber scombrus (Atlantic mackerel): 133990206
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Entry
133990206 CDS
T10651
Symbol
pax3a
Name
(RefSeq) paired box protein Pax-3a isoform X1
KO
K09381
paired box protein 3/7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133990206 (pax3a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133990206 (pax3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
133990206
NCBI-ProteinID:
XP_062284406
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Position
11:13817565..13836174
Genome browser
AA seq
487 aa
AA seq
DB search
MTALAGGLPRMMRPSPHQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGVRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQSASPEVDKKIEE
YKRENPGMFSWEIRDKLLKDGVCDRNNVPSVSAISRVMRSKFGGIGEDDEDDDEGVKREM
EENEPRTKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SGLQPYQLSDSPYPPTSIAQASEQPSTVHRPQPLPPTSVHQSGLSSSAGSQDGGSAYCLS
SGRHGFSGYSDSFVAPTGHANTVNPAISNSLSPQVMGLLNPGGVPHQSQSDFALSPLTGG
LEPNGGMAASCHGSQRLEALPGLTSMPTLPSTQSYCPPSYTSQAYAMDHHPSYQYGQYSQ
SKVPFII
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcttgcaggaggtttaccgagaatgatgagacccagtcctcaccagaactac
ccgaggggaggatactctctcgaagtctccactccgttaggacagggtcgggtcaaccag
ctcggcggtgtcttcataaacggcagacctctacccaaccatatccgccataaaatcgtg
gagatggcccatcacggtgtccggccgtgtgtcatctcccgtcagctccgggtgtcccat
ggctgcgtctccaaaatcctctgccgttaccaggagactggctccatcaggccgggggcc
atcggaggcagcaagccaaagcaaagcgcgtctccagaggtggacaagaagatcgaggag
tacaagagagaaaacccgggcatgttcagctgggaaatcagggacaaattgctgaaagat
ggggtctgcgacaggaacaacgttccctcggtaagcgccatcagtcgcgtcatgcggtca
aaattcggtggaattggtgaggatgacgaagacgacgatgaaggggtgaagagggagatg
gaggaaaacgaaccacggacaaaacacagcatcgacggcattctgggagacagatccagt
cactcagatgagggctccgacgtagactcagagccaggcctacctctgaagaggaagcaa
cgccgcagtcggaccaccttcacagcagaacagctggaagagctggagagggccttcgaa
cgcacacactaccctgacatctacacacgagaagagctggctcagagagccaaactcacg
gaggctcgagttcaggtgtggttcagcaacagaagagctcggtggaggaagcaagcagga
gccaatcaactgatggcttttaaccacctcatccctggcggttttccaccatcagctatg
tcaggcctgcagccctatcagctgtcagacagcccctaccctcctacttccattgctcaa
gcatcagagcagcccagtacagtccaccgaccgcagcctctgccccccacctccgtgcac
cagagtgggctcagctcatcggcaggctcccaggatggaggctctgcatactgcctgtcc
tctggacgtcatggtttctcaggatactcggacagttttgtggccccgacaggacatgcc
aacactgtcaaccccgccatcagcaacagcctctcaccacaggtgatgggccttttgaac
ccaggtggagtaccacatcagtctcagagtgactttgccctctccccactgaccggaggc
ctggagcctaatggtggcatggctgccagctgtcatggctcccagcgcctggaggcttta
ccaggcctgaccagtatgcctaccctgcctagcacccagtcttactgcccaccctcctac
acctcacaagcctacgccatggaccaccatccatcctaccagtatgggcaatacagtcaa
agcaaggtgcctttcattatatga
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