Scomber scombrus (Atlantic mackerel): 133990230
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Entry
133990230 CDS
T10651
Symbol
eif4g1a
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1a isoform X1
KO
K03260
translation initiation factor 4G
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133990230 (eif4g1a)
03012 Translation factors [BR:
ssco03012
]
133990230 (eif4g1a)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133990230 (eif4g1a)
mRNA cycle factors
Stress granule specific factors
133990230 (eif4g1a)
Translation factors [BR:
ssco03012
]
Eukaryotic type
Initiation factors
eIF-4
133990230 (eif4g1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
133990230
NCBI-ProteinID:
XP_062284437
LinkDB
All DBs
Position
11:15481440..15502476
Genome browser
AA seq
1700 aa
AA seq
DB search
MNKPPQPITGPTSVPNPAPSPGLTQATYGPGQPTSLVFATPPPPQMNSAPQPRQFAAGPR
TLHQQGYYQNRPAMAASAPRVQTSSGPRAVGPTHVYPPSSQMMMISQQQLSFAGSPQGYF
IPPGQPYRAPYMPPTQQYPVTSGTAGFYPGTSPAEYSAYAGAYYPAQAQYSTSVQPAPVM
INPAQQQQQAPPPQQPPAQPQGPAKRERKPVIRIRDPNQGGRDITEEIMSGGRSATTPTP
PQASITDVSPAQTNGEVTQPVTTVTRDENAEPSASAESPPPPPTVNPEPVVEAKQEMDSQ
MAPPTELAAQSVAPTLASEVPTPSIKDQQSPAPLLPAVTSTPPPAEAINKVDTKVGDTVD
APVGPSASLAAQEVPVKTEEPQAAPASAEKAPEKEEKKTEKVEKEEQLTSAKVEPAAEAT
AIVKPVIVTKEEAPTKTATEVSQPPPSAQEPAAPQTQTAAPSSAPEPEPTPAETAEPLLS
NGLPQDTEELTEDVAISDTTPLDKPDTSQSQESTPVVKMATSAQEEEEEEEKKKKKEEGK
EKIEDAPPAPASCPTEESTMQAATSVPKKRRNMKELNKREAIGDLLDAFTEEQNAKPASE
PSSTQADPVLVAPAEPPAEVADETWEEKEDKQNTETDKTKSSPEAKEQKYEYKEEQWKPI
DPEEKKRYDREFLLGFQFIGASMNKPEGLPLISDVVLDKVNKNPLRPADPARMMNAGPDF
TPSYLGNLGSRSVGGPRGPPPGPRRSQQGQRKEPRKIITSMSLHDDVQLNKAEKAWKPSV
KKPTRRQEEVEEEVANTDEARTQDLFKRLRSILNKLTPQKFQELMKQVTDLPIDTEERLK
GTIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTSDKPGVFVNFRKLLLNRCQKEFEKDQ
DDDEIFEKKQKELEASKDDEERERLRVELEDSKDQARRRSLGNIKFIGELFKLKMLTEAI
MHDCVVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFNQMDKIIKERKTSSRI
RFMLQDVLDLRRSGWVPRRGDQGPKTIDQIHKEAELEEHREQIKVQQQLLSKKDGGGGGG
GGGGGGGGRMGGNMGGRGPHTPGGGRNSQPQDEGWNTVPISKNRPIDTTRLSKITKPGSL
DFNNQLLAPGGKGMWGSWGKGSSGGTGAKPASGDQDSGRPATSTLNRFSALQQSGSLLSS
SDSDRRVPQRSSSSRERGGDRDRDRFDRFDRSEGREGRDDRSTQNQITKRSFSRESQERG
GRGGDSRATNEPVRRVASMTDDRDRGSRDRGSRDRGSRDRGSKDRGSRDRVPSKDLTAVK
RESAPTPPPSLPKSTLTEEELEKKSSAIIEEYLHINDMKEALQCVAELNSASLLYVFVRN
GMESTLERSTIAREHMGLLMHQLIKAGTLPTEQYYKGLQEILEVAEDMAIDIPHIWLYLA
ELITPMLHEGGIPMGQLFREISKPLVPLEMAGVLLVQILKLLCKGMTPKKVGAMWTEAGL
NWSEFLAKDEDINKFVTDQKVEFTTGEETESKEPGKKAFSGEELTKQLDRFFEDKANNQR
IRDWVEANLDEQQAASNLFVRALMTSVCQSAIICDTPYRVDAKQINQRANLLQRYLCDEQ
KELQALYALQALMVHMEQPANLLRMFFDALYDEDVIKEEAFYKWESSKDPAEQTGKGVAL
KSVTAFFTWLREAEEESDKE
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaccaccacagcctataacgggacccacctctgtcccaaaccctgccccttcc
ccaggattgacacaggccacctacggacctggacaacccacatctcttgtttttgccaca
cctccacctccacaaatgaactccgcaccacagcccagacagtttgctgcagggccccgt
actttacaccaacagggttactatcagaaccggccggctatggctgccagcgctccaaga
gtccagacaagtagcgggcctcgagctgttggacccactcatgtctaccctcccagctcc
cagatgatgatgatttcacagcagcagctctcttttgctggctcccctcagggttacttc
atcccccctggacagccataccgggccccatatatgccacctactcagcagtatcctgtg
accagcggtacggcaggcttctacccgggaactagccctgctgaatactctgcctatgca
ggagcatactatccagcacaggcgcagtactctacatctgtccagcctgcaccggtcatg
atcaaccccgcccagcaacagcaacaagctccgcctcctcagcaaccaccggcacagcca
caaggcccagcaaagagggaacgcaaaccggtaatcagaatacgagaccccaaccagggc
gggcgcgatatcacagaggagatcatgtcaggtggaagatccgcgaccacaccgactccc
ccacaggcctccataacagatgtaagtcctgcacagaccaatggagaagttacacagcct
gtcactacagtgacaagagatgaaaacgcagagccttctgctagcgctgaaagtccacca
cctcctcccacagtaaacccagagcctgtggtcgaggcgaaacaggaaatggacagccag
atggcaccgcctactgaattagccgcacaatctgtagcccctacactggcttctgaggta
ccaaccccatcgataaaggaccagcagtctcccgctcccctccttccagcagtaacatct
actcctcctcctgctgaggcaataaataaagtcgatactaaagttggtgacacagtagac
gctcctgtaggtccttcagcatcactggctgcgcaagaggtccctgtcaaaacggaagaa
ccacaggctgcccctgcttcagctgagaaggcaccagaaaaggaggaaaagaaaactgag
aaagtggagaaagaagagcagttgaccagcgctaaggtggagcctgcagctgaggctaca
gcaattgttaaacctgttattgtgacaaaagaagaagcacctacaaagacggcaacagaa
gtatctcagcctccaccctctgcacaggagcctgctgctccacagactcagactgctgcc
cccagctctgcccccgaacctgaacctacaccagctgaaacagcagagccgctcctctcc
aacggccttcctcaagacactgaggaactgactgaggatgtggcaatttcagacactaca
ccccttgacaagcccgacacttctcaatctcaggaatccacacctgtggttaaaatggca
acgtcagcccaagaggaggaggaggaggaggagaagaagaagaagaaagaggaggggaag
gagaaaattgaggatgccccccctgcccctgctagctgccctacagaggaatctactatg
caagctgctacatctgtgccaaagaagagaaggaacatgaaggaactcaacaagagggag
gctattggagacctcctggatgccttcacagaggagcagaacgccaagccagcttctgaa
ccctcgtccactcaggccgaccctgtccttgttgctccagctgaacctcccgctgaggtc
gcagatgagacctgggaggagaaagaggacaagcagaacacagaaactgataagactaaa
tcctcacctgaggcaaaagagcagaaatacgagtacaaagaagaacaatggaagccgata
gacccagaagagaaaaagcggtacgacagggagttcctcctcggcttccagtttatcggc
gctagcatgaacaaacctgagggtctgccgctcatcagtgacgtggttttggacaaggtg
aacaagaatcccctgcgacctgctgacccagctcgaatgatgaatgctggtcctgatttt
actccctcatacttggggaatctcgggagccgatcagtgggcggaccacgaggaccgcca
cctggaccacgtcgctcccagcagggtcagcgtaaagagcccaggaaaatcatcaccagc
atgtccctccacgacgacgtgcagctcaacaaggctgagaaagcctggaagccctctgtg
aagaagcccactcgccgccaggaggaagtggaggaggaagtagccaacacggacgaggcc
aggactcaagacttgttcaagcgtctgcgtagtatcctcaacaagctgacaccccagaag
tttcaggagctgatgaaacaggtgacagatctgccgatcgatacagaggagaggctgaag
ggaaccatcgacctcatctttgagaaggccatctcagagcccaacttctctgtggcctac
gccaacatgtgccgctgccttatggggttgaaagtccccacctcagacaagccaggagtt
tttgtgaacttccgcaaactgctgctcaaccgctgccagaaagagtttgagaaggaccaa
gatgatgatgagatctttgagaaaaagcaaaaagagttagaggcttctaaagatgatgag
gagcgtgagcgcttgagggtggaactggaagactccaaagaccaggcccgccgccgctcg
cttggtaacattaagttcattggtgaactcttcaagttgaagatgctgacggaggccatc
atgcacgactgtgtagtgaaactactgaagaatcacgatgaagagtctctggagtgtctc
tgcaggctgctctccacaattggcaaggacctggactttgagaaggccaagccccgtatg
gatcagtatttcaaccagatggacaagatcatcaaagagagaaagacctcatccagaatc
cgcttcatgttgcaagatgtgctggaccttagaaggagtggctgggtgcctcgtagagga
gaccagggtcctaaaacaattgaccagatccacaaggaggcagaattggaggagcacagg
gaacagatcaaggtccagcagcagctcctgtccaagaaggacggaggaggaggaggagga
ggcggtggcggtggcggcggcggcaggatgggagggaacatgggaggccgaggccctcac
acacctggaggcggccggaacagccagccccaggatgaaggatggaacacggtgcccatc
tccaagaacagacccatcgacaccacccggctcagcaagatcacaaagcccggttctctg
gacttcaacaatcaactgttggctccagggggcaaaggcatgtggggcagctggggtaaa
ggcagcagtggaggaacaggagctaaaccagcaagtggagaccaagattctggtcgtcca
gccaccagcaccctcaaccgcttctcagccctgcagcagtctggttcattgttgtcttca
tccgactctgatcgcagagttcctcagaggtcaagctccagccgcgagcgtggcggtgac
agagacagggaccggtttgaccgattcgatcgcagcgagggacgagaaggtcgcgacgac
aggagcacccagaaccaaatcactaagagaagcttcagcagagagtcccaggagcgcggc
gggaggggcggagacagtagggccacgaatgagccggtgcgccgcgtggccagcatgacc
gatgaccgggacagaggaagcagagacagaggaagccgggatcggggaagcagagaccga
ggaagtaaggacaggggaagcagagacagagttccaagcaaagatctcacagcagtcaaa
cgtgagagcgcccccactcctcctccttctcttcctaaatctaccttgactgaagaggag
ttggagaagaagtccagtgcaatcattgaggaatatctccacatcaatgacatgaaggag
gcgttgcagtgtgtggcagagctcaacagtgcctcgctgctctatgtgtttgtgcggaac
ggcatggagtcgacacttgagcgcagcaccattgctagagagcacatgggcttgttgatg
caccagctcataaaggcagggacattgcccacagagcagtactacaaagggctacaagag
atcctggaggtagcagaagacatggccatagatatacctcacatctggctctacctggct
gaactcattacccccatgctgcacgagggaggcatccctatgggacagctcttcagggag
atctcgaagcctctggtacctctggagatggccggtgtgctgctggtacagatcctcaag
ttgctctgcaaaggaatgactcctaagaaggttggggccatgtggactgaagctgggctg
aactggagcgagttcttggccaaggatgaagacatcaacaagtttgtcactgatcagaag
gtggagttcacgacaggagaggagacggagtcaaaggaacccgggaagaaggccttcagt
ggagaggagctcaccaaacagctggacaggttctttgaggacaaggccaacaaccagcgt
atcagagactgggtcgaggctaacttggatgaacagcaggctgcctccaacctgtttgta
cgagcattgatgacatccgtgtgtcagtctgccatcatatgcgacaccccatacagggtg
gatgcaaagcagatcaaccagagagccaatctgctgcagagatacctgtgtgatgagcag
aaagagctgcaggcgctttacgccctccaggctctgatggtgcacatggagcagccagca
aacctgctgcggatgttcttcgacgccttgtacgatgaggacgttattaaagaggaggcc
ttttacaaatgggaatccagtaaagaccctgcagagcaaacaggcaaaggcgtggccttg
aaatcagtcacagccttcttcacctggctccgcgaggccgaggaggagtctgacaaagaa
taa
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integrated database retrieval system
