Scomber scombrus (Atlantic mackerel): 133990239
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Entry
133990239 CDS
T10651
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133990239 (irf4a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
133990239 (irf4a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
133990239
NCBI-ProteinID:
XP_062284450
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Position
11:17020749..17027321
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AA seq
467 aa
AA seq
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MIKEMNLEEDSGLSVSCGNGKLRQWLIDQIDSRGYAGLVWENDEKSIFRIPWKHAGKQDY
NREEDAALFKAWAMFKGKYKEGVDKPDPPTWKTRLRCALNKSNDFDELVERSQLDISEPY
KVYRIIPEGAKRGMKMSTMEETPSHVNAFGYIPPYSSLHTQVPSYMVSQERRDWRDYKQP
EQQPFPPPHHHGPHADLQYGQCHYPSPISRAWPASHTENGFQLSFHTYLSETQPPVYTMD
HNNAITDFSLHVSLFYRESLVKEVTTTSPEGCRITSSSSSTSPSSSSSSSPSLEDKFHSG
AEIILFPFPYPESQRQGADMLPNILERGVLLWMAPDGLYAKRLCQGRIYWEGPLAPYMDK
PNKLEKEQPCKLFDTQQFLIELQDFAHNGRHVPRHQVVLCFGDEYPDPQRPRKMITAQVE
PMFARKLVYYYQQNNGHYLRAYDHIQEQNPSPTIDYPSQRPLQHIQE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagagatgaacttggaggaggacagcggcctgtcagtcagttgtggcaatggc
aaactgagacagtggcttatagatcagattgacagcaggggatatgctggcctggtttgg
gaaaatgatgaaaaaagcatctttaggattccgtggaaacatgcaggaaagcaagactat
aacagagaagaggatgctgcactcttcaaggcatgggcaatgttcaaggggaaatataag
gaaggcgtcgacaagccagatccccccacatggaaaacaagattacgttgtgctctcaat
aaaagcaatgactttgatgagttggttgaaagaagtcagctggacatctccgagccctac
aaagtctacagaatcattccagagggagccaaaagaggaatgaagatgagcactatggag
gagacaccatcacatgtaaatgcctttggctatattcctccatattcatctctgcacacc
caggtacccagctatatggtttctcaggagaggagggactggagggattacaaacaacca
gaacaacaaccctttcctcctccacatcaccatggaccgcatgcagacctgcagtatggc
cagtgccactacccttcacccatcagccgggcctggcctgcgtcacacacagaaaatggt
tttcagctctcttttcacacctacttgtcagagacccaaccccctgtgtatacaatggac
cacaacaatgccataacagatttcagcctgcacgtgtctctattctacagagagtctttg
gtaaaggaggttaccaccactagcccagaaggttgtcggatcacctcttcatcctcctcc
acctctccatcatcctcatcctcttcttccccaagcttagaggacaagtttcacagtggg
gcagaaatcattctctttccattcccgtatcctgagtctcagagacagggcgctgacatg
cttcctaacatactggaaaggggagtgctcctgtggatggcacccgatgggttgtacgct
aagcgcctttgccagggacggatatactgggaaggacctctggctccatatatggataaa
cccaataaactggagaaggagcagccatgtaagctgtttgacacccagcaattccttatt
gaacttcaagattttgcccataatggacgacatgttccgagacaccaggtggtcctatgt
tttggagacgaataccccgacccgcagcgtccaaggaagatgatcacagcacaggtggag
ccaatgtttgccagaaaattggtgtactattaccagcagaacaatggccactacctgcgg
gcctatgatcacatccaggaacagaacccctctccaacaatcgactatccttcccagaga
cctctacagcatattcaggagtga
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