Scomber scombrus (Atlantic mackerel): 133990296
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Entry
133990296 CDS
T10651
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
133990296
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NCBI-GeneID:
133990296
NCBI-ProteinID:
XP_062284550
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Position
11:complement(12872423..12904514)
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AA seq
1167 aa
AA seq
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MPNVMDRNEVSPASAATMKKKAVGGSGCSHISAPRAAASNCTRSNSSQKCLDSGSPGAAS
AKQHGAASNIVMDETEDGEEESKFQHPRLRRAGGSGSGGGGGGGGGGGGSIRMKNFTPGG
GAASSASRRNSNKEPCLMHTEDAPAAPRPTASSRATQTQTPCPGDAAQRRETSRASGAEA
SASAVAVEALNATTGDGCNSVAPISSMKCNKNGECRRDSGTGSLRSIISKQERQTVGSGR
AEDGGSAKRGACNSTTASMDGSITPGGSLAGGHGGESVNPGTTPVSSGVPEKKDSKVSFS
NAPSRKASSSLHGPTQTQQPRNSVTFQKPEDGPPIVPAEDAEPRGSQASFMQRQFSSMLQ
PGVNKFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVG
ITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFI
VDFISSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEE
IFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMENDTWSE
LYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSS
RRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVN
FNCRKLVASMPLFANAEPNFVTAMLTKLRFEVFQPHDYIIREGTIGKKMYFIQHGVCSVI
TKGTLAMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAF
ETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNQENEMIQEIVKYDREMVKLVDLQRPRA
MSMTPSIGGIFAPPGQSQTGSAIATLQQAVAMSFCPQMASPLVGPGTLQSPRMVRRFQVM
QNLSSPVSMSPLQSQPPQTLGGMFGSAISSPPVQSPLAASGRTFQYMASAGPSGSQLSLV
QHHAPSPTQTQQRPASHKSTHSLHAGSLSQDTRALSASQLSLPQEGTPQAASAAPSPPPS
TRTSNTSIGPAQPPHPSLPGPSGVGRSAGAQQRVAFASTPPPSGPAAAGAVAAAAGSGPP
DSGVPKKDSIVSLPELDSARSRLSSNL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgtcatggacaggaatgaggtttcaccggcgtctgctgccaccatgaaaaag
aaggcggtgggcggcagtggctgcagccacatcagcgcacccagagctgcagcgtccaac
tgcacaagaagcaacagcagccagaagtgtctggactctggttctccaggcgcagcgagc
gctaagcagcacggtgcggccagcaacatcgtgatggacgagacggaggacggagaagag
gagtccaagtttcagcatccgcggttgcgccgagccggggggagcggcagtggcggaggt
ggaggaggaggaggaggaggaggtggcagtatcaggatgaagaactttacgccaggaggg
ggagccgcgtcctcggcttccaggagaaactccaacaaggagccctgccttatgcacaca
gaggacgctcctgccgccccacggcccactgcttcctccagagctacccagacccagaca
ccctgtccgggcgatgctgcccagcgcagagagaccagcagagcatctggggcggaggcg
tcggcatcagcggtcgcggtagaggctttaaacgcgacaacgggtgatggttgcaacagc
gtcgcaccaatttccagcatgaaatgcaacaaaaacggagaatgcaggagggactcgggt
accgggagcctgcgctcaatcatctccaagcaggagaggcagacagtagggtcggggcgg
gccgaggacggagggagcgccaagcgaggagcctgtaactcgaccaccgccagcatggac
ggctcaatcacaccaggcgggtctctagccggggggcacggaggagagagtgtgaacccc
ggcactacccccgtgtccagcggtgtccccgagaaaaaggactccaaggtgtccttctct
aacgcaccaagccggaaagcctcgtcctctctgcatggcccgactcagacccagcagccc
aggaactctgtcactttccagaagccggaggatggaccgccaattgtacccgccgaggat
gcagaacctcggggcagccaagccagcttcatgcagcggcagtttagtagtatgctgcag
cctggagttaacaaattctccttacgcatgtatggtagtcaaaaagcagtggagagagag
caagagagggtaaaatcagctggaaattggattatccacccttacagcgatttcaggttc
tactgggatttcacaatgctgctatttatggtgggcaacttgatcatcatccccgtgggc
atcaccttcttcaaggaagagaccacgacaccctggatcatcttcaatgtggtctccgac
actttcttcctcatggatctggtgctcaactttcgcactggaatcatcattgaggacaat
tcggacatcattttggaccctaaaaccattaagaaaaagtacctaaagacttggttcatt
gtggactttatctcctccatcccagtggattacatattcctcatagtggagaaagggatt
gactcggaggtgtacaagacagctcgagccctgaggatcgtccgcttcaccaagatccta
agtcttctgaggctgttgaggctctccagattaattcgctacattcaccaatgggaagag
atcttccatatgacctatgaccttgccagtgcagtgatgcggatctttaatctgattggt
atgatgctgctgctgtgtcactgggatggctgcctacagttcctggttcccatgctgcag
gacttcccctcagactgctgggtgtccctcaacaaaatggagaatgatacctggtccgag
ctttactcctttgctgtgttcaaggcaatgagccacatgctgtgcatcggttatggccgg
caggccccggagagtctatctgatatctggctcactatgctgagtatgattgtaggagcc
acttgctatgctgtttttattggccatgcaacagctcttatccaatccttggactcctcc
agacgccagtatcaggaaaagtacaaacaagtggagcagtatatgtccttccacaagctt
cctgctgacttccgacagaaaatccatgactattatgagcacagatatcagggcaagatg
tttgatgaggagagcatcctgggagaactcagcgagcctctaagagaggaaattgttaac
ttcaactgtcgcaagctggtggcttccatgccactgtttgccaacgcagagccaaacttt
gtgaccgccatgctgaccaagctgcgtttcgaagtattccagccacatgactacattata
agggagggcaccattgggaagaaaatgtacttcatccagcatggagtctgcagcgtcatc
actaagggcacccttgcaatgaaactctctgatggctcatattttggagagatctgtcta
ttgacgaggggtcgacgaacagccagtgtccgagcagaaacttattgtcgactctactct
ctctcggttgaccacttcaatgaggtgctggaagagtatcccatgatgagacgagccttt
gagactgttgctattgaccgtctagaccgcataggtaaaaagaactccatcttaatgcac
aaggttcagcatgatctcaactctggtgtcttcaacaaccaggagaacgagatgatccag
gagattgtcaagtatgaccgtgaaatggtgaagctggtggacctgcagcggccacgggcc
atgtctatgaccccgtccatcggtggtatctttgctcctcctggccagtcgcagacaggc
tctgctatcgccaccctccagcaggctgtggctatgagcttttgtccccagatggcgagt
cctttggtcggtccagggactctgcagtctccccgtatggtgcgaagatttcaggtgatg
cagaacctgtccagcccagtctccatgtctcctcttcagtctcaaccccctcagacactt
ggagggatgtttggatctgcaatctccagcccacctgtccaaagcccgctcgcagcttcg
ggacggactttccagtatatggcaagcgcaggaccctctggatcccagttgtccctagta
cagcaccatgcacccagcccaacacagacccagcagaggcctgcctcacacaagagcacc
cactcccttcatgcaggcagcttgagccaggatacccgtgccctgtctgcctcccagctt
tcactcccccaggagggaacaccacaagctgcctctgcagcccccagccctccgccctcc
acgcgcacctccaacacctccatcggccctgctcagccccctcaccccagcctgcccggg
ccctcaggggtggggagatcagcgggtgcgcaacagagggtggcctttgcatccacacct
cctcccagtggacctgctgcagcaggggcagtagcagcagctgctggatcaggacctcca
gactctggagttcccaagaaagattcaattgtcagccttccagagctagactctgccaga
tcccggctgtcttccaacttgtga
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