Scomber scombrus (Atlantic mackerel): 133990297
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Entry
133990297 CDS
T10651
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133990297
04121 Ubiquitin system [BR:
ssco04121
]
133990297
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133990297
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133990297
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133990297
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
DUF8608
FAR1_N
HypA
RING_Ste5
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
133990297
NCBI-ProteinID:
XP_062284551
LinkDB
All DBs
Position
11:complement(12907417..12912852)
Genome browser
AA seq
311 aa
AA seq
DB search
MAEAPPRPCRFFCHRCSAEISPRLPDYTCPRCESGFIEELPEERSTENGSAPTFSTSDQN
RSAFENMDHQHLFTFPSGYGPFALGIFDENFDLRTRLPTEDNRETENRREREMASRQRYS
ARQPRGRHVPRRQGTRHEGVPTLEGIIQQLVNGIIAPTAMPNIGMGPWGMLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRERIKSLPIISITEEHVGAGLECPVCKEDYSVAET
VRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSPS
SPSNENAASNS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccccacggccctgccggtttttttgtcaccggtgttcagcagagatt
agcccgcgtttgccggactatacctgtccacgctgtgaatctggattcattgaggaactg
cctgaggaaagaagtactgaaaatgggtccgcacctacattctccaccagtgatcagaac
cgctctgcctttgagaacatggatcaccaacacttattcacatttccctctgggtacggt
cctttcgccctcgggatatttgatgaaaacttcgaccttcgaacgcgtctgcccacggag
gacaatcgagagacagaaaaccggagggaacgggaaatggcatcacggcagcgatacagt
gcaaggcagccacggggtcgacatgttcctcggcggcagggtacgcgccatgaaggagtg
cccacattagagggaattatccagcagctagttaatgggatcatagcgcctacagccatg
ccaaacattggaatgggaccttggggtatgttacattccaatccgatggactatgcctgg
ggtgctaatggacttgatgctatcataacgcagttattgaaccagtttgaaaacacgggt
cctcctcctgcagacagagaaaggataaagagtttacccatcatctccattacagaggaa
cacgtgggtgctggtttagaatgtccagtgtgcaaagaagactacagcgttgcggagact
gttagacaactgccatgcaatcatttgtttcacaatgactgtatagtcccgtggctggaa
cagcatgacacgtgtcctgtgtgcaggaagagtctcagtggacagaacacagccacagac
ccgccagggttatcaggaatgaacttctctccctcttcctcatcctcttcttcccccagc
tcacctagcaatgagaacgctgccagcaactcatag
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