Scomber scombrus (Atlantic mackerel): 133990327
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Entry
133990327 CDS
T10651
Name
(RefSeq) transferrin receptor protein 1-like
KO
K06503
transferrin receptor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03273
Virion - Lassa virus and SFTS virus
ssco04144
Endocytosis
ssco04145
Phagosome
ssco04216
Ferroptosis
ssco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
133990327
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133990327
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133990327
04145 Phagosome
133990327
09143 Cell growth and death
04216 Ferroptosis
133990327
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133990327
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133990327
04090 CD molecules [BR:
ssco04090
]
133990327
Peptidases and inhibitors [BR:
ssco01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
133990327
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133990327
Exosomal proteins of colorectal cancer cells
133990327
CD molecules [BR:
ssco04090
]
Proteins
133990327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
TFR_dimer
PA
DUF4731
Motif
Other DBs
NCBI-GeneID:
133990327
NCBI-ProteinID:
XP_062284588
LinkDB
All DBs
Position
11:complement(8930713..8947792)
Genome browser
AA seq
769 aa
AA seq
DB search
MDQARTTISKIFNGEPHSYTRFNLTQNMEGDNSQVEMKLSSDMDEEVGENGVGDHSLNNS
NRKPYVAQKLGRTPKNLCFMAATILLIFIIGYLIGYLVHRKKEVAPTCAASKLPFDVPVA
HETGAAPLMDWDDVKKLLAEKLSPRNFDTAFSDLSSSNHQAGSLGDEVLGKIVHKKFKEN
GMNTWTDEHFIKVHDAPVSGFNKFTFKGERETQVQGFLSYSATKEVTGAILYAFYGQEND
FRMLRDRNIDLSGRVILVRAGRISFAEKVANAAKMNASAVLIYPDRADYNIGESTQLYGH
VHLGSGDPYTPGFPSFNHTQFPPVQSSGLPQIVAQTITEAMATNILKKLGGQIVPQEWGG
VTKLGDETDVITLSVSNELTEKKINNVFGVIKGFVDSDRYVVIGAQRDAWGQGFATSTVG
TSVLVELARSISEMVKNDGFKPRRSIVFASWSAGEYGSVGATEWLEGYLSSLSMKAFSYI
SLDRIVTGRTAFKVASSPLMYSVIKSALDEVKTQSSGATLMSQYGKGSWESNIMEPMKLD
NAAFPFLAFSGIPSVSFRFTSSNSDYPYFGTMQDNRDRLNAATSNQVPQMAEAAARFAGH
IALRLVHDHLLRLDLSKYDKIIRTRVAQINAKVKDVQRLKPDMLPRSLTMQWLISASGSY
SRASRSLAADIQNSNLEDIEMCRVLNDRIMTVERNFLSPYVSPRESPFRHILVGSGSHTL
QGLLNHLEALKSGKAEADLFRNQFALATWTIQGCANSLAGNIWALDNEI
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggcaaggacaacaatatcaaaaatttttaatggggagccacactcctacaca
cgcttcaacctgacccaaaacatggaaggggataacagccaggtggagatgaagctgtcg
tccgacatggatgaggaggtcggggaaaatggtgtgggggatcacagtctcaacaactcc
aatcgcaaaccgtacgtggctcagaaacttggacgcacacccaagaacctctgcttcatg
gcagcaactatcctcctcatctttatcatcgggtacttgattggttacctcgtccatcgg
aagaaggaagtggctcccacctgcgcagcctccaagctcccttttgatgtgcctgtggcc
cacgagacaggtgctgccccactcatggactgggatgatgtcaagaaactgctcgctgaa
aaattgagtccacgcaacttcgacactgccttcagtgacttaagcagtagcaaccaccag
gctggttctcttggtgatgaagttctcgggaaaatagtgcacaagaagtttaaagagaac
ggcatgaacacctggaccgatgagcacttcattaaggtgcatgacgccccagtgtccggc
ttcaacaaatttactttcaagggcgagcgtgagacacaagtacaaggattcctgtcgtac
agtgccactaaagaagtaacgggtgccatcctgtatgcattctacggacaggaaaatgac
ttcaggatgctgcgtgacaggaacattgatctcagtggcagggtcattctcgtcagagct
ggtaggatcagctttgcagagaaggtagccaatgctgccaaaatgaatgcctctgctgtg
ttgatctacccagaccgcgctgattacaatatcggggaatccactcagctctatggacat
gtccacctgggttcaggggatccttacacccccggcttcccctccttcaaccacacacag
tttcctcctgtccagtcttcaggcctgccacagatcgtggctcagaccatcacagaagcc
atggccaccaacatcctgaagaagctgggaggtcagattgtgccacaagagtggggaggc
gtcaccaaactgggagatgagaccgatgtcattactttgagtgtcagcaacgaacttaca
gagaaaaagataaataatgtcttcggggtcatcaaagggtttgtggattcagaccgatat
gtggttattggtgcccagagggacgcatggggtcaaggttttgctacatcaactgtcgga
accagcgtccttgttgagctggctcgttccatctcagaaatggtgaaaaatgatggattc
aaaccacggaggagtattgtgttcgctagctggagtgctggagaatatgggagtgttggc
gccaccgagtggttggagggttatctgtcttctttgagcatgaaagccttctcctacatc
agcctggatcgtattgtaacaggtcgcactgcatttaaagtggcctccagtcccttgatg
tacagtgtgatcaaaagtgctctggatgaggtgaaaacccagagcagtggtgcaactctc
atgtctcaatatggaaaaggcagctgggagagtaatataatggagcccatgaagctggac
aatgctgcatttcctttccttgccttttcgggcattccgtctgtctcatttagattcacc
tccagtaattcagactacccgtactttggcacaatgcaggataatcgggacaggttgaac
gcggccacatccaaccaagttcctcaaatggctgaagccgccgcccggtttgcaggtcat
attgctctgaggctggtccatgaccatctgctgagattggatctttcaaagtatgacaag
attattcgtactcgtgtggctcagatcaacgcaaaagtcaaggatgttcaaaggttgaag
cctgatatgctgcccaggagtctgaccatgcagtggttgatctcagcctctggctcctac
agccgtgcctctcgcagcctggcagcagacattcagaacagcaacctggaagacatcgag
atgtgccgcgtccttaatgaccgcatcatgacggtggaaaggaacttcctgtcgccatac
gtgtctccgagagagagtcctttccgccacatcctggtcggcagtggctcgcacacactc
caggggctgctcaaccacctcgaagccctcaagagcggcaaggccgaggccgacctgttc
cggaaccagtttgccctggcgacctggaccattcagggctgtgccaactcgttagctggg
aacatctgggctctggataatgaaatctaa
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