Scomber scombrus (Atlantic mackerel): 133990352
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Entry
133990352 CDS
T10651
Symbol
mcoln1a
Name
(RefSeq) mucolipin-1a
KO
K04992
mucolipin 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04020
Calcium signaling pathway
ssco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133990352 (mcoln1a)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133990352 (mcoln1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133990352 (mcoln1a)
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133990352 (mcoln1a)
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Gene cluster
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
133990352
NCBI-ProteinID:
XP_062284624
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Position
2:complement(14547477..14564171)
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AA seq
588 aa
AA seq
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MAATEQQDFSVRRGLSNLVTHYGSTDSSGEHDHHSHSHGNNHINHRLPTAMAGHWVAASP
EEEALRRKLKYFFMSPCDKYHAKGRKPYKLILQLLKIVIVTAQLVLFGLSNQVVVTFKEE
NTMTFKHLFLKDYDESSDDFAVYTQQDVYDHIFYAVEQYLALPETTVGRYAYVYDVGVNG
SALSLCQQYYKKGRIDPANDTFSIDPRIITDCIGVDPLSKPPGPLTNSYKNFTLKFYKFI
NVTIEFQLKAINIQTIINNEIPDCYTFYITIVLDNKSHSGKVKIRLENQASIKECKDPSV
SGHAENYARVAFDVAVAMVCILSLLLCGRSILRGVTLQQEFVQFFRESLDRKVCWADRME
FINGWFILLIISDILTITGSVIKIGIESKNMSSYDLCGILLGTSTLLVWVGVIRYLTFFQ
KYNILIVTLRAAFPNVIRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLIN
GDDMFVTFSEMQESSTLVWLFSQIYLYTFISLFIYMVLSLFIALITGAYEAIKQQTQEPI
HITDLHAFIAECTDAPSSGKFRGLETSPCSFFCCCDRTTTYEDVLLVN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacagagcagcaggacttctcagtacgacgaggcctgtccaacttggtgact
cactacgggtccacagacagcagcggcgagcatgaccatcacagtcacagtcatggcaac
aaccatatcaaccatcggttacccacggcaatggcaggtcattgggttgcagccagtccg
gaagaagaggcccttcgcaggaagttaaaatattttttcatgagtccttgtgataaatat
catgccaagggccgcaaaccttataaactgatcctgcagctgctcaagatcgttattgtc
acagctcagttggtgctgttcggcctcagtaaccaggtggtggtgaccttcaaggaggag
aataccatgaccttcaagcacctcttcctcaaagactacgacgagtcttcagatgacttt
gctgtttacacgcagcaggacgtctatgatcacatcttctatgcggtggagcagtattta
gccttaccagagaccacagtgggacgctacgcatacgtctatgatgttggtgtgaatggc
agcgcgctctctctctgccaacagtactacaagaagggacgcattgacccagctaacgac
accttcagtatagaccctcgtatcataacagactgtataggtgtggaccctctgtcaaag
cctccaggtccactaacgaacagctacaagaactttacactcaagttctacaagttcatt
aatgtcaccatagagtttcagctgaaggcgatcaacatacagaccatcatcaacaatgag
atcccagactgctacactttttacataacaatagtgctggacaacaagtctcacagcggc
aaggtgaagatccgactagaaaaccaggcgtccataaaggagtgtaaagacccgagtgtc
tctggacatgctgagaattatgcgcgtgtggcgtttgatgtcgctgtggctatggtgtgc
atactgtcactgctgctgtgtggacgctccatactgcgaggagtcaccctgcaacaggag
tttgtgcagttcttcagggagagtctagatcgtaaagtgtgctgggcagatcgcatggag
ttcattaacggctggttcatcctcctcatcatcagcgacatcctcactatcactggcagt
gtcattaaaatcggcattgagtctaagaatatgtcctcctatgacttatgtggcatcctc
ttgggtacctccactctcttggtgtgggtgggagtcattcgctacctcactttcttccag
aagtacaatatcctgatcgtaacacttcgagcagcgttccccaatgtgattcggttttgc
tgctgtgtggctgtcatctatctgggctactgcttctgtggctggatcgttctgggaccg
taccatgtgaagtttcgttctctgtccatggtatcggagtgcctcttctccctcattaac
ggggacgacatgttcgtgacgttctcggagatgcaggagagcagcactctggtgtggcta
ttcagccaaatttacctgtacaccttcatctccctcttcatctacatggtgctgtcgctc
tttatcgctctcatcacaggagcctacgaggccatcaagcaacaaacccaggaacccata
cacatcacagacctgcacgccttcatagcagagtgtacagacgcaccaagctctgggaag
ttcagaggtctggagacctcaccgtgctccttcttctgctgctgtgacagaacaaccact
tatgaagacgtcctgttggtgaactga
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