Scomber scombrus (Atlantic mackerel): 133990393
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Entry
133990393 CDS
T10651
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
Brite
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
133990393
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Major cadherins
133990393
CD molecules [BR:
ssco04090
]
Proteins
133990393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133990393
NCBI-ProteinID:
XP_062284674
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Position
11:complement(16511196..16577648)
Genome browser
AA seq
910 aa
AA seq
DB search
MYSLHEGSGLLLLAVLAGLQIAAECRGTPPCRPGFSEDVYKVVVPDITEKGQPLFKVRFF
NCGRGGLVHFECSNPSDFRIEADGAVYAARSLQLSGLRASPLLIKASDDTTQQQWVTQVQ
VAPSTLSSQQVEEVAVPPVMSKDLKEIVFPSRNMDSQLKRMKRDWVIPPINVPENSRGPF
PQELVRIRSDHDKNRSLRYSVTGPGADQPPTGIFIIDPISGELSVNKPLDREHIANFHLR
AHAVDLNGNQVENPIDIVINVIDMNDNRPEFTHQVWNGTVPEGSKPGTFVMTVTSVDKDD
PKTANGMLRYKILSQNPESPTSNMFTINNKTGGIITVAAGLDREKVPQYTLIIQATDMEG
NPMYGLSNTATAVIRVIDINDNPPEFTAETFFGEVPENRVNVIVANLTVTDKDQPNTPAW
NAVYKITGGDPTGRFSVPTDPTTNEGLVTVVKPIDYEISRTYVLTVEARNEVPLARGIHS
PRQSTATVSIRVIDVNESPYFEPNPKFIKIEEGMVPESTLGTFTAQDPDRFMQQTIRYSK
LADPANWLRIDPTTGRVSTIAVLDRESPFVKNSLYNATFLATDSGEPPASGTGTLQIFLV
DINDNAPKVFPQEAEICQKPEPNAINITALDGDLNPNAGPFAFELAHRPSDVRRNWTITR
ISGDYAQVSLKIGFLESGIYELPIIITDSGNLPMSNTSYLRVKVCQCDINGDCTDQQHII
AAGLGTGAIISILLCIIILLILVLLFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEE
GGGEEDQDYDLSQLQQPDTIEPDAIKPVGIRRLDERPLHPEPQYPMRSAAPHPGDIGDFI
SEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGGDQDYDYLNDWGPRFRK
LADMYGGSDD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtactcactacacgagggcagcggtctgcttctgctggcggtcttggcaggactgcag
attgcagcagagtgcaggggcaccccaccatgcaggccaggcttctctgaagatgtatac
aaggttgtggtgccagatatcacagagaaaggacagcccctcttcaaggtgaggtttttc
aactgtggccgaggtggtctggttcactttgaatgcagtaacccatctgacttccggata
gaggcagacggagcagtgtatgccgccaggagtcttcagctctctgggctccgagcgtca
ccgctgctgatcaaggccagtgatgacaccactcagcagcagtgggtgacccaagtccag
gtggcaccctccacactctccagccagcaggttgaggaagttgctgtccctccagtcatg
tccaaggacttgaaggaaatagtgtttccatcacgaaacatggacagccaactgaaacgg
atgaagagagactgggtcatccccccaatcaatgtcccggagaactcacgaggcccattc
ccgcaagagcttgtccggatccgatcggaccatgacaaaaaccggtccctaagatacagt
gtgacaggccccggtgctgaccagccccccactggcatcttcatcatcgacccaatttct
ggagagctatctgttaacaagcccctggaccgagagcacatcgccaacttccatctgaga
gctcatgcagtggacctgaatggcaaccaggtggaaaaccctattgacattgtgatcaat
gtgatcgacatgaacgacaacagacccgagttcacccatcaggtctggaacggcactgtt
ccagagggttccaagccaggaacatttgttatgacagtaacatctgttgacaaagatgac
cccaaaacagctaatgggatgctgcgttacaagatcctgtctcagaatcctgagagtccg
acctccaacatgttcaccatcaacaataaaacaggaggcatcattacagtggcggcaggc
ctggaccgagagaaagtgcctcagtacacactgatcatccaggccactgatatggagggc
aaccccatgtacggtctctccaacacagccactgctgtcatcagagtcattgacattaat
gacaatccgccagaattcactgctgagacgtttttcggcgaggtgcctgaaaaccgtgtg
aatgtcattgtggccaacctaacggtgactgacaaggaccaacccaacacgccagcctgg
aatgctgtctacaaaatcaccggaggcgaccccaccggcaggttctctgtgcccactgat
ccaaccactaatgagggcctggtaacagtcgtcaagcctattgactatgaaatcagtagg
acgtatgtgctgacagtggaagcgagaaacgaggttcctctagccagaggcatccactcc
ccccgtcagtccactgccacagtctccatcagagttatagacgtcaatgagagcccgtac
ttcgaacccaaccccaaattcattaaaatcgaagagggcatggtgcctgagtcaacgctg
gggacctttactgcacaggatcctgatcgcttcatgcagcaaaccataagatactccaaa
ctagcagatccagccaactggctaagaattgaccccaccacaggtcgagtctcaacaatt
gccgttctggaccgagaatccccctttgtgaagaacagtttgtacaacgcaacattcctg
gctactgacagcggagaacctccagcaagtggcacaggtactctccagatcttcctggtg
gatatcaacgacaacgctcctaaggtgtttccccaggaggcagagatatgccaaaagcca
gagccaaatgccatcaacatcactgcgctcgatggagacctgaaccccaatgctgggcca
tttgcctttgagttagcccaccggccctctgatgttaggagaaactggaccatcacaaga
atcagtggtgactatgctcaggtgagcctaaagattggctttcttgaaagtggtatctat
gagctccccatcataatcacagactcgggcaacctacccatgtccaacacctcttacctg
cgggttaaagtgtgccagtgtgacatcaacggagactgcactgaccagcaacacatcatt
gctgccggtctgggcacgggcgccatcatttccatccttctctgcatcatcatcctcctc
attcttgtgctgctgtttgtggtgtggatgaagcgccgcgataaggagcgtcaggctaag
cagctcctcatcgatcctgaggatgatgtgagagacaacattctcaagtatgatgaggaa
ggcggcggagaagaggatcaggattacgacctgagtcagctccagcagccggacacgata
gagcctgatgccatcaagcctgtggggatccgccgtctagacgagagacccctccatcct
gagcctcagtaccccatgagatcagcagcaccccaccctggagatattggagatttcatc
agtgagggacttaaggcagcagacaacgaccccaccgctcctccctacgactccctgcta
gtgtttgactacgagggcagcggctccacagctggctccctaagctccctcaactcctcc
agcagtgggggtgaccaggactacgattacctcaacgactggggccctcgctttagaaaa
ctggcagacatgtacggcggaagtgatgactag
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