Scomber scombrus (Atlantic mackerel): 133990411
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Entry
133990411 CDS
T10651
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133990411 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133990411 (ss18)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133990411 (ss18)
GBAF(ncBAF) complex
133990411 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
133990411
NCBI-ProteinID:
XP_062284701
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All DBs
Position
11:complement(16354831..16364543)
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AA seq
356 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPQPPHGHNMPSEGMVSGGPPAPHM
QNQMNGQMPGPNHMPMQGPGPGPNQPPNMPSGSMNMPPSSHGSMGGYNHAVPSSQGIPAQ
SQMNMTQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGGQHYQGQQNPMGMM
GQVNQGNHVMGQRPMPPYRPPQQGNAQYGQQQEAYQQGPPQQQGYPPQQQYPGQQGYPPQ
QQGYGPSQSAPGQYPNYPQGQGQQYGAYRPPQPGPPQGQQQRPYGYDQGQYGNYQQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacaggcagcgtgggaagggtgatataacacccgctgga
atacaaaagttactagacgaaaacaaccagctgattcagtgtataatggactttcagagc
aaaggaaaaacagcagagtgttcacaatatcaacagatgctgcatagaaatttagtgtac
ctggccacaatagcagactccaatcagaacatgcagtctctccttccggctccacccact
caaaacatgcccatgggccctggtgggatgaaccaaagtggaccccctccccagcctcct
cacggtcacaacatgccctctgagggtatggtcagtggtggccctccagccccacacatg
cagaaccagatgaatggacagatgcctgggcctaatcacatgcccatgcaaggtcccgga
ccaggccccaaccagcccccaaacatgcccagtggctctatgaatatgccccccagcagc
cacggctcaatgggtggttacaatcacgctgtcccttcctcccagggcataccagctcag
agccaaatgaacatgacccagggccagcccatgggaaactatgggccacggccaaacatg
aacatgcagcccaatcaaggccctatgatgcaccagcagcctccttcccagcagtataac
atgcctcctggtggtggcggtcagcactaccaagggcaacaaaacccaatgggcatgatg
ggccaggtcaaccaaggaaatcatgtcatggggcagaggccaatgcccccctacagaccc
ccacaacaaggtaatgcccagtatggccagcagcaggaagcatatcagcaaggccctccc
cagcagcagggttaccctcctcaacagcagtacccaggtcagcagggctacccaccacag
cagcagggttacggcccctcccaaagtgccccaggacagtaccccaactatcctcagggc
cagggacagcagtatggagcctatcgcccccctcaacctggacccccacagggccagcag
caacgcccttatggctatgaccagggccagtatggaaattaccagcaatga
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